| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is kch [C]
Identifier: 119716582
GI number: 119716582
Start: 2509598
End: 2510698
Strand: Direct
Name: kch [C]
Synonym: Noca_2355
Alternate gene names: 119716582
Gene position: 2509598-2510698 (Clockwise)
Preceding gene: 119716581
Following gene: 119716583
Centisome position: 50.33
GC content: 71.57
Gene sequence:
>1101_bases GTGGCCGAGGACTCCAGCGACATCACGCAGGGTCGCGTGCGCGGGAAGCTCTCGCTGCCCGACCAGGCGCGTTCGCCCTG GTGGGAGCTCGGCCGCCGGCTGCTGGCCGCCCTCGCGATCCTGGTCGGCACCGTGCTGCTGGTCTGGCTCGACCGGGAGG CGTACGTCGACGGCAACGACCCGACCGGGCGGGTCGACCTGGTCGACTCGCTCTACTACACGACCGTCACGCTGAGCACG ACCGGGTACGGCGACATCGCGCCGGTCGAGGCGCACGCCCGGATGATCAACGCGTTCGTCGTCACCCCGCTCCGCATCGC CTTCCTGGTGCTGCTGATCGGGACCACCCTGGAGGTCCTCGCCTCCCAGGGCCGCGAGCTGTTCCGAGCCGCCCGTTGGA GGAAGCACATGAGATCCCACGTCGTCGTGGTCGGCTACGGCACCAAGGGCCGGGCCGCCGTCGACACGCTGGTCAACAAC GGTCAGGACCGCGAGTCGATCATCGTGGTCGACCCCGGCGCGGCGGCGCTCCAGGAGGCGCACGCCGACGGGCTCGCGGT CGTCACCGGCGACGCCACCCGGCAGGACGTGCTGCGCCGGGCCGGGGTGGAGAACGCCGACCAGGTCATCATCACCACCG ACCGGGACGACTCCAACGTCCTCGCGACGCTGACCGTGCGGCAGCTCAACCCGGAGGTCTGGATCGTCGCGGCGGTGCGC GAGCAGGAGAACGTCGCGCTGATGCGCCAGTCCGGGGCGAACTCGGTGATCACCTCCTCCGACGCCGTCGGGCGGCTGCT CGGGCTCTCGTCCCTCTCGCCGACGCTCGGCTCGGTGATGGAGGACCTGCTCACGTACGGCGAGGGCCTGGAGGTCGCCG AGCGCGACCTCCTGGTCAGCGAGGTCGGCCGACAGCCCCAACGGCTGCCCGACCAGGTGATCGCCGTCGTGCGGGACGAG AAGGTCTACCGCTACTTCGACCCGGTGGTCACCCAGCTCGCCCGGGGCGACCGGCTGATCGTCGTACGCCCCGCCAAGGA GCTGCCCTGGGCGCCTCGGCCCGGCACCCACGACGAGGACCTCGCCAACGACGACGACTGA
Upstream 100 bases:
>100_bases ACGGTCTTCCCGCAGAAGGCCACCACGCGCGCCAGACTCGAGCTCGTGTCGCGGCTGCGTCGCTTCGGTGCGCGGCCCGA CAACGACTAGATTCACCACC
Downstream 100 bases:
>100_bases CGCCGCGCCGTCTGCGAGACCTGCTGATGCCACGATCGCCCGCGACCACTAGCCTCTCCTCGGGGGTACATGGGTGGGGG TAGGGATGCCGGGGGACCGG
Product: TrkA domain-containing protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK2 [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MAEDSSDITQGRVRGKLSLPDQARSPWWELGRRLLAALAILVGTVLLVWLDREAYVDGNDPTGRVDLVDSLYYTTVTLST TGYGDIAPVEAHARMINAFVVTPLRIAFLVLLIGTTLEVLASQGRELFRAARWRKHMRSHVVVVGYGTKGRAAVDTLVNN GQDRESIIVVDPGAAALQEAHADGLAVVTGDATRQDVLRRAGVENADQVIITTDRDDSNVLATLTVRQLNPEVWIVAAVR EQENVALMRQSGANSVITSSDAVGRLLGLSSLSPTLGSVMEDLLTYGEGLEVAERDLLVSEVGRQPQRLPDQVIAVVRDE KVYRYFDPVVTQLARGDRLIVVRPAKELPWAPRPGTHDEDLANDDD
Sequences:
>Translated_366_residues MAEDSSDITQGRVRGKLSLPDQARSPWWELGRRLLAALAILVGTVLLVWLDREAYVDGNDPTGRVDLVDSLYYTTVTLST TGYGDIAPVEAHARMINAFVVTPLRIAFLVLLIGTTLEVLASQGRELFRAARWRKHMRSHVVVVGYGTKGRAAVDTLVNN GQDRESIIVVDPGAAALQEAHADGLAVVTGDATRQDVLRRAGVENADQVIITTDRDDSNVLATLTVRQLNPEVWIVAAVR EQENVALMRQSGANSVITSSDAVGRLLGLSSLSPTLGSVMEDLLTYGEGLEVAERDLLVSEVGRQPQRLPDQVIAVVRDE KVYRYFDPVVTQLARGDRLIVVRPAKELPWAPRPGTHDEDLANDDD >Mature_365_residues AEDSSDITQGRVRGKLSLPDQARSPWWELGRRLLAALAILVGTVLLVWLDREAYVDGNDPTGRVDLVDSLYYTTVTLSTT GYGDIAPVEAHARMINAFVVTPLRIAFLVLLIGTTLEVLASQGRELFRAARWRKHMRSHVVVVGYGTKGRAAVDTLVNNG QDRESIIVVDPGAAALQEAHADGLAVVTGDATRQDVLRRAGVENADQVIITTDRDDSNVLATLTVRQLNPEVWIVAAVRE QENVALMRQSGANSVITSSDAVGRLLGLSSLSPTLGSVMEDLLTYGEGLEVAERDLLVSEVGRQPQRLPDQVIAVVRDEK VYRYFDPVVTQLARGDRLIVVRPAKELPWAPRPGTHDEDLANDDD
Specific function: Probable potassium channel protein [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=215, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 39970; Mature: 39839
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDSSDITQGRVRGKLSLPDQARSPWWELGRRLLAALAILVGTVLLVWLDREAYVDGND CCCCCCCCHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCC PTGRVDLVDSLYYTTVTLSTTGYGDIAPVEAHARMINAFVVTPLRIAFLVLLIGTTLEVL CCCCCHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQGRELFRAARWRKHMRSHVVVVGYGTKGRAAVDTLVNNGQDRESIIVVDPGAAALQEA HHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHH HADGLAVVTGDATRQDVLRRAGVENADQVIITTDRDDSNVLATLTVRQLNPEVWIVAAVR CCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEEEEEEC EQENVALMRQSGANSVITSSDAVGRLLGLSSLSPTLGSVMEDLLTYGEGLEVAERDLLVS CCCCHHHHHHCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH EVGRQPQRLPDQVIAVVRDEKVYRYFDPVVTQLARGDRLIVVRPAKELPWAPRPGTHDED HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCC LANDDD CCCCCC >Mature Secondary Structure AEDSSDITQGRVRGKLSLPDQARSPWWELGRRLLAALAILVGTVLLVWLDREAYVDGND CCCCCCCHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCC PTGRVDLVDSLYYTTVTLSTTGYGDIAPVEAHARMINAFVVTPLRIAFLVLLIGTTLEVL CCCCCHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQGRELFRAARWRKHMRSHVVVVGYGTKGRAAVDTLVNNGQDRESIIVVDPGAAALQEA HHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHH HADGLAVVTGDATRQDVLRRAGVENADQVIITTDRDDSNVLATLTVRQLNPEVWIVAAVR CCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEEEEEEC EQENVALMRQSGANSVITSSDAVGRLLGLSSLSPTLGSVMEDLLTYGEGLEVAERDLLVS CCCCHHHHHHCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH EVGRQPQRLPDQVIAVVRDEKVYRYFDPVVTQLARGDRLIVVRPAKELPWAPRPGTHDED HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCC LANDDD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]