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The map label for this gene is yfkH [H]

Identifier: 119716581

GI number: 119716581

Start: 2508604

End: 2509587

Strand: Direct

Name: yfkH [H]

Synonym: Noca_2354

Alternate gene names: 119716581

Gene position: 2508604-2509587 (Clockwise)

Preceding gene: 119716579

Following gene: 119716582

Centisome position: 50.31

GC content: 69.51

Gene sequence:

>984_bases
ATGTCCGGGGCGGAGGGAGCAGAGCGCCAGGAACGCGCCCCCCGGGCCTCCCCGCTGGCCCTCCGGCTGCGCCGGCTGCG
CGAGGTGGTGTGGCGGCTGTTCGTCACCACCGTCGCCTCCTGCCTGAAGTACCGGGTGACCGGCCTGGCGGCGGAGGCGG
CGTTCTTCGCCGTGCTCTCCGTGCCCCCGCTGATCTTCGCGATGGCCGGCGCCATCGGGTACGTCACCGACCAGTTCAGC
CCGGCCCAGGTCGCCGACGTGCGGGCCGCGGTCGTCGATCTCTCCGCGCGGGCGCTCACCGACGGGGCGGTGCACAAGAT
CATCGAGCCGACCATCGACGACGTGCTCCGGGGCGGCCGTTTCGACGTCATCTCGCTCGGGTTCGTGCTGGCGCTGTGGT
CCGGCTCCCGGGCGCTGAACGTCTTCGTCGACACCATCACGATCATGCACGGGCTCGGCGGGCACCGCGGGATCGTGAAG
ACCCGGGCGCTCTCGTTCCTCCTCTACGTCCTCGCGATGGTCACCGGGGTCGTGACGATCCCCCTGGTGATCGCCGGTCC
GAGCCTGGTCGAGGACTGGCTGCCGGAGCGGCTGGACCTGCTGATGGGGTTCTACTGGCCGGTGGTGACCGTCGTGTGCA
TCTGCTTCCTCGCGACGCTCTACCACGTGTCAGTGCCAGTGCGGACGAACTGGAGCTTCAACCTCCCGGGTGCGACCTTC
TCGTTGTTCTGCTGGGTCGTCGGGTCCTACCTGCTGCGGTGGTTCCTGACCGTCACGGCGACCGACTCACGCTCGATCTA
CGGTCCGCTGGCGGCACCCATCGCGGTGCTGCTCTGGCTCTACCTGGTGTCGATCGCGGTGCTCATCGGGGCAGCGGTCA
ATGCGGCCTTCGACACGGTCTTCCCGCAGAAGGCCACCACGCGCGCCAGACTCGAGCTCGTGTCGCGGCTGCGTCGCTTC
GGTGCGCGGCCCGACAACGACTAG

Upstream 100 bases:

>100_bases
ACGAGGGCGAGGTCGGCCGTGACGACGTTGTGACCAACCAGTGCTGGCGGCTGGTTGGCGGATGCGCGGATGTCGGATCG
CATGGGCCTACGGTAGATCC

Downstream 100 bases:

>100_bases
ATTCACCACCGTGGCCGAGGACTCCAGCGACATCACGCAGGGTCGCGTGCGCGGGAAGCTCTCGCTGCCCGACCAGGCGC
GTTCGCCCTGGTGGGAGCTC

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSGAEGAERQERAPRASPLALRLRRLREVVWRLFVTTVASCLKYRVTGLAAEAAFFAVLSVPPLIFAMAGAIGYVTDQFS
PAQVADVRAAVVDLSARALTDGAVHKIIEPTIDDVLRGGRFDVISLGFVLALWSGSRALNVFVDTITIMHGLGGHRGIVK
TRALSFLLYVLAMVTGVVTIPLVIAGPSLVEDWLPERLDLLMGFYWPVVTVVCICFLATLYHVSVPVRTNWSFNLPGATF
SLFCWVVGSYLLRWFLTVTATDSRSIYGPLAAPIAVLLWLYLVSIAVLIGAAVNAAFDTVFPQKATTRARLELVSRLRRF
GARPDND

Sequences:

>Translated_327_residues
MSGAEGAERQERAPRASPLALRLRRLREVVWRLFVTTVASCLKYRVTGLAAEAAFFAVLSVPPLIFAMAGAIGYVTDQFS
PAQVADVRAAVVDLSARALTDGAVHKIIEPTIDDVLRGGRFDVISLGFVLALWSGSRALNVFVDTITIMHGLGGHRGIVK
TRALSFLLYVLAMVTGVVTIPLVIAGPSLVEDWLPERLDLLMGFYWPVVTVVCICFLATLYHVSVPVRTNWSFNLPGATF
SLFCWVVGSYLLRWFLTVTATDSRSIYGPLAAPIAVLLWLYLVSIAVLIGAAVNAAFDTVFPQKATTRARLELVSRLRRF
GARPDND
>Mature_326_residues
SGAEGAERQERAPRASPLALRLRRLREVVWRLFVTTVASCLKYRVTGLAAEAAFFAVLSVPPLIFAMAGAIGYVTDQFSP
AQVADVRAAVVDLSARALTDGAVHKIIEPTIDDVLRGGRFDVISLGFVLALWSGSRALNVFVDTITIMHGLGGHRGIVKT
RALSFLLYVLAMVTGVVTIPLVIAGPSLVEDWLPERLDLLMGFYWPVVTVVCICFLATLYHVSVPVRTNWSFNLPGATFS
LFCWVVGSYLLRWFLTVTATDSRSIYGPLAAPIAVLLWLYLVSIAVLIGAAVNAAFDTVFPQKATTRARLELVSRLRRFG
ARPDND

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 35680; Mature: 35549

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGAEGAERQERAPRASPLALRLRRLREVVWRLFVTTVASCLKYRVTGLAAEAAFFAVLS
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]