| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716493
Identifier: 119716493
GI number: 119716493
Start: 2418722
End: 2419663
Strand: Direct
Name: 119716493
Synonym: Noca_2266
Alternate gene names: NA
Gene position: 2418722-2419663 (Clockwise)
Preceding gene: 119716489
Following gene: 119716494
Centisome position: 48.51
GC content: 73.78
Gene sequence:
>942_bases GTGCCCTTCCGGCCCGGGCTCCCCATCACCCGCGTCGACCTGCCGAAGACGGCCGCCGACCGCGAGGAGGTCTGGGACGC CCTCCGCGGCCCCTACGGCCGCCACGCCCGCCCCGGAGCGCGCCTGGCGATCCTCTGCTTCACCGAGGACCGCCGCAGCG CCGAGCTGGCCAGCCAGCATCTGTCCAACCACCTCGACACCGTGGGTATCACCACGCACATCCGGCTGTGGGCGGACGGG GAGCGGTGGCGTGAGTTCAACACCGGCCAGACCGGACTTCAGACCCCGGCGACCGCCGAGCGGATCGCGGCCGCGACCGT GCTGACCGGCGCCGCCCAGCCGGCCGCGAGCCGGGCCTCCCTGGCCGCGTCCATGGTCGGGGACCGTGAGCCGATCGCCC AGCTGATCCCCGTGGCCCGGGCCGCGGCCGCGGGCAGCACTCCCGCCTTCGAGCGGGACTGGGCACTGGACCGGCTCGAG CAGTTCCACACCGACGGCAACCGGATCTCCGACGTCGACGGCGCACGGATGCTGGTGGCCCTGGAGACGATCAGCACCCG CGACGCGCTGTGGGAGGACATGAGCAGGGAGAACCACACCTCCCACATGGCCCTCTGGAACGACCTGACCCGACGCGCCC CCGACGAGGTCCGCGCGGCGCCGGCCTCCATGCTCGGCTTCGCCAGCTGGCTGCACGGCGATGGCGCCAAGGCCTGGTGC GCCCTCGACCAGGTGCCCGCCGACCGGCCCTACTCCATGGCCGCCATCGTCGCCTCGGCCCTGCAGAACGGCATCCACCC GCGCGAGTGGGAGCGATACCAGACCCAGATGCGCGACCTCGCCGGCGAGCTCGACGAGTCCTTCGTGCCCAAGCCTCCCG AACACCCGCGGGACCTGCCGAGCACGCAGCCAATCACCGACCGCCCCGCCCCGGGCCGCTGA
Upstream 100 bases:
>100_bases AGCCAGGACTCCCGTACGACGACCATCATGGGCGCATACATCTATCAGCCGGCCCCCGCTGGTAGTCCGGTCAACATGGC CTGAGGAGTCGATCGTCCTC
Downstream 100 bases:
>100_bases GAAGGGACAGCGCGATGAACTACGACGACACCGACCCGATCGACGACGCCCAGACAAGCGCCACCGAGCGCCAGCTGCGC CGCCTGGTGGTGCCCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MPFRPGLPITRVDLPKTAADREEVWDALRGPYGRHARPGARLAILCFTEDRRSAELASQHLSNHLDTVGITTHIRLWADG ERWREFNTGQTGLQTPATAERIAAATVLTGAAQPAASRASLAASMVGDREPIAQLIPVARAAAAGSTPAFERDWALDRLE QFHTDGNRISDVDGARMLVALETISTRDALWEDMSRENHTSHMALWNDLTRRAPDEVRAAPASMLGFASWLHGDGAKAWC ALDQVPADRPYSMAAIVASALQNGIHPREWERYQTQMRDLAGELDESFVPKPPEHPRDLPSTQPITDRPAPGR
Sequences:
>Translated_313_residues MPFRPGLPITRVDLPKTAADREEVWDALRGPYGRHARPGARLAILCFTEDRRSAELASQHLSNHLDTVGITTHIRLWADG ERWREFNTGQTGLQTPATAERIAAATVLTGAAQPAASRASLAASMVGDREPIAQLIPVARAAAAGSTPAFERDWALDRLE QFHTDGNRISDVDGARMLVALETISTRDALWEDMSRENHTSHMALWNDLTRRAPDEVRAAPASMLGFASWLHGDGAKAWC ALDQVPADRPYSMAAIVASALQNGIHPREWERYQTQMRDLAGELDESFVPKPPEHPRDLPSTQPITDRPAPGR >Mature_312_residues PFRPGLPITRVDLPKTAADREEVWDALRGPYGRHARPGARLAILCFTEDRRSAELASQHLSNHLDTVGITTHIRLWADGE RWREFNTGQTGLQTPATAERIAAATVLTGAAQPAASRASLAASMVGDREPIAQLIPVARAAAAGSTPAFERDWALDRLEQ FHTDGNRISDVDGARMLVALETISTRDALWEDMSRENHTSHMALWNDLTRRAPDEVRAAPASMLGFASWLHGDGAKAWCA LDQVPADRPYSMAAIVASALQNGIHPREWERYQTQMRDLAGELDESFVPKPPEHPRDLPSTQPITDRPAPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34451; Mature: 34320
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRPGLPITRVDLPKTAADREEVWDALRGPYGRHARPGARLAILCFTEDRRSAELASQH CCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH LSNHLDTVGITTHIRLWADGERWREFNTGQTGLQTPATAERIAAATVLTGAAQPAASRAS HHHHHHHCCEEEEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH LAASMVGDREPIAQLIPVARAAAAGSTPAFERDWALDRLEQFHTDGNRISDVDGARMLVA HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE LETISTRDALWEDMSRENHTSHMALWNDLTRRAPDEVRAAPASMLGFASWLHGDGAKAWC HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEE ALDQVPADRPYSMAAIVASALQNGIHPREWERYQTQMRDLAGELDESFVPKPPEHPRDLP EHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC STQPITDRPAPGR CCCCCCCCCCCCC >Mature Secondary Structure PFRPGLPITRVDLPKTAADREEVWDALRGPYGRHARPGARLAILCFTEDRRSAELASQH CCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH LSNHLDTVGITTHIRLWADGERWREFNTGQTGLQTPATAERIAAATVLTGAAQPAASRAS HHHHHHHCCEEEEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH LAASMVGDREPIAQLIPVARAAAAGSTPAFERDWALDRLEQFHTDGNRISDVDGARMLVA HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE LETISTRDALWEDMSRENHTSHMALWNDLTRRAPDEVRAAPASMLGFASWLHGDGAKAWC HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEE ALDQVPADRPYSMAAIVASALQNGIHPREWERYQTQMRDLAGELDESFVPKPPEHPRDLP EHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC STQPITDRPAPGR CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA