Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716489

Identifier: 119716489

GI number: 119716489

Start: 2413381

End: 2413770

Strand: Direct

Name: 119716489

Synonym: Noca_2262

Alternate gene names: NA

Gene position: 2413381-2413770 (Clockwise)

Preceding gene: 119716488

Following gene: 119716493

Centisome position: 48.4

GC content: 67.95

Gene sequence:

>390_bases
ATGTCCACCACCGTCACCTTCGCCGGCAACCTGGCCGAGGCTCCCGAGCTGCTCTCCACCCGCGAGAACAAGCCGTTCGT
CAGCTGTCGGGTCCTGGTCAACCGGCGCGTACAGAACGACGACGGGGAGTGGGTCAACGACGAGCCCACTGCCCACAACG
TCAAGATCTTCGGCTCGGCCGCCACGCACGTGCACGACAGCTGCGGATCCGGCGACCCGATCTTCGTCCACGGCCTCGAG
CGCACCGAGAGCTGGCCGGACAAGGAGACCGGCGAGAAGCGCACCAAGGACGTCGTGGTCGTCGACAATCGCTTCGGCGA
GGTCGGCGTCTCGCTCAAGTACGTCTCCGCGCGCATCGAGCGCGCCGCCCGCCCGGCTCAGGCCAGCTGA

Upstream 100 bases:

>100_bases
TCCGAACAAGTTCGGCCGATGTGATCGCTGCCGGACCCCGATGGGACCTAGGTGACTGCGGGACCGATCCGAACGTCTCG
CAGTCACCTAGGAGGAAGTC

Downstream 100 bases:

>100_bases
CCGCGCGGAGGTTCCGATGGATCTCGTCGTACAGTCCCCGGACGAGCTGCTCGCCGCAGTGCCGCACGTCCTCGGCTTCA
AGCTTTTCTGGACTAGCGAC

Product: single-strand binding protein/primosomal replication protein n

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSTTVTFAGNLAEAPELLSTRENKPFVSCRVLVNRRVQNDDGEWVNDEPTAHNVKIFGSAATHVHDSCGSGDPIFVHGLE
RTESWPDKETGEKRTKDVVVVDNRFGEVGVSLKYVSARIERAARPAQAS

Sequences:

>Translated_129_residues
MSTTVTFAGNLAEAPELLSTRENKPFVSCRVLVNRRVQNDDGEWVNDEPTAHNVKIFGSAATHVHDSCGSGDPIFVHGLE
RTESWPDKETGEKRTKDVVVVDNRFGEVGVSLKYVSARIERAARPAQAS
>Mature_128_residues
STTVTFAGNLAEAPELLSTRENKPFVSCRVLVNRRVQNDDGEWVNDEPTAHNVKIFGSAATHVHDSCGSGDPIFVHGLER
TESWPDKETGEKRTKDVVVVDNRFGEVGVSLKYVSARIERAARPAQAS

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14166; Mature: 14035

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTVTFAGNLAEAPELLSTRENKPFVSCRVLVNRRVQNDDGEWVNDEPTAHNVKIFGSA
CCCEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC
ATHVHDSCGSGDPIFVHGLERTESWPDKETGEKRTKDVVVVDNRFGEVGVSLKYVSARIE
CCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH
RAARPAQAS
HHCCCCCCC
>Mature Secondary Structure 
STTVTFAGNLAEAPELLSTRENKPFVSCRVLVNRRVQNDDGEWVNDEPTAHNVKIFGSA
CCEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC
ATHVHDSCGSGDPIFVHGLERTESWPDKETGEKRTKDVVVVDNRFGEVGVSLKYVSARIE
CCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH
RAARPAQAS
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA