| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716472
Identifier: 119716472
GI number: 119716472
Start: 2395666
End: 2396268
Strand: Direct
Name: 119716472
Synonym: Noca_2245
Alternate gene names: NA
Gene position: 2395666-2396268 (Clockwise)
Preceding gene: 119716471
Following gene: 119716473
Centisome position: 48.05
GC content: 73.96
Gene sequence:
>603_bases ATGCAGCGTGAGCGACGACGAGACCCCTACCCGTGGACCTGGGAGATCCCCGTAGCGGTGGCCTTGGCGACCCTGTTCGT CATCGTCATCGGCATCCAGCTCGGCCGATCAGTCGCCAATCTGCTCGCCGGCGCCGGATGGACCTGGCCCGACGCCAACG CCGGCGCGTTCCCCTCACCCATCGGCACCGCGTTCTGGACCAGCCTTCCCGGCGTCCTCGGCGGCCACGCCGACGCCGGG CTGCCCAGCCCCACCCCCGACGGTCTGGCCGGCCGCGGCCTGGTCTGGGTCAGCCTCGCCCTGGCCGAGGTCGCGCTGCT CACCGCGACCATCTGGGTCGGCGCGTGGGCCTACCAGCGCTGGGGCCCGGGCCGCATGCGCGGCATGGCGACCGCAGCCG AGGCCGAGAAGCTGCTCGGCGTCACCCGGCTCCGCAAGGTCGCCGGCATCGTCCGCCCGGACCTCCACGGCAAGCAGGCC GCCCCGACACCGGCACCGGTCCAGCGCACCCCCGGCGACCTCACCGAACAACCCGGCCCGCAGCTGGGCCACGGCCTCAG CCCGTGGCTCCTGGACGGCCGCCGAACGAAGGAACACCGATGA
Upstream 100 bases:
>100_bases CACGCCCGAGCCGCGCCGTGTGATCGCACCGAAGCCCTGACGGCACATAGGTGACCAGCAAGGCCCAACGACCCACGACC GCCTGGAGGTGGCCAGACCG
Downstream 100 bases:
>100_bases GCCACGAAACCCCACTGCACGGCAACCCGACACTTCGCACCCGCGGCCGCCACCTCTTGGGCGGCATCATCTGTCGCCGT CGCGGACACCGCCCCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSPIGTAFWTSLPGVLGGHADAG LPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQRWGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQA APTPAPVQRTPGDLTEQPGPQLGHGLSPWLLDGRRTKEHR
Sequences:
>Translated_200_residues MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSPIGTAFWTSLPGVLGGHADAG LPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQRWGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQA APTPAPVQRTPGDLTEQPGPQLGHGLSPWLLDGRRTKEHR >Mature_200_residues MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSPIGTAFWTSLPGVLGGHADAG LPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQRWGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQA APTPAPVQRTPGDLTEQPGPQLGHGLSPWLLDGRRTKEHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21348; Mature: 21348
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSP CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IGTAFWTSLPGVLGGHADAGLPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQR HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQAAPTPAPVQRTPGDLTEQPGP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QLGHGLSPWLLDGRRTKEHR HHCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSP CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IGTAFWTSLPGVLGGHADAGLPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQR HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQAAPTPAPVQRTPGDLTEQPGP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QLGHGLSPWLLDGRRTKEHR HHCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA