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The map label for this gene is 119716473

Identifier: 119716473

GI number: 119716473

Start: 2396507

End: 2398027

Strand: Direct

Name: 119716473

Synonym: Noca_2246

Alternate gene names: NA

Gene position: 2396507-2398027 (Clockwise)

Preceding gene: 119716472

Following gene: 119716474

Centisome position: 48.07

GC content: 71.01

Gene sequence:

>1521_bases
ATGCCTCGCCCCGTGCGGGGACAGCGTTCCCGAGGTGGCGCGATGAAGCTGAGGTTCGACCCCTGGGACGTGGGCTGGCG
CATCGGTAACGCCCACGAGCCGCGAGGCGGCGAGCTGTGGGTCCCGTGGGACCGCACCGCCGGCGTAATCGGCCCGCAGG
GATCCGGCAAGACCCTCGACCTGCTCACCCCTGCACTGCTCGGCGCTCCGGGTGCCGCCCTGGTGACACTGACGAAGGTC
GAGGACCTGCTGCTCAGCCTCACCGAACGCTCCCGCGACGACCGGCCCTGCGTGGTGCTCGACCCCTTCGGCCTGGCCGA
GGGCGTCGTCGACGAGCTGATCTGGGACCCGATCGCCGGCTGCGTAGACCCCAAGGTCGCCGAGCGGCGCGCCAAGGCTT
TCACCGCCGGCACCGTCAAGGGCGCGATCACCGGCGGCACCGGCGACGATGCTGCGCGGTTCTACGCCGCCGAGTCCGCG
AAGGTGCTGCAGGGCTACTTCCACGCCGCGGCGCTGACCGGTAGGACGCTCGAGGACGTGCTGCAGTGGGTCGCCAACCC
CACCGCAGCCACCCAGCCGATGGAGATCTTGCGGCGGCACCCGCACGCCGAGCCGTTCTGGCACGGCCTCCTGCACGGTG
CGCTGAACGGTGACGACCGCACCGCCGGCAACACCGTCACCACGGTGCAGCAGGCGGTCTCGCTGTTCTTCCAGGCCGAC
ATCCGCCGCCGCTGCATTCCCAGCCCCGGACGTCCCGCCACCGACCTCGCCGACGTGATCCGTCGACGCGGCACCATCTA
CCTGCTCGGCCGCGAAGACCCCTACGCCTCGGCCAGCCCGCTGATGACCGCCGTGGCCGAGCACGTCTTGGACACCGGCC
TGCTCCTGGCCAACAGCTCCCCGCGGGGCGGCCGGCTGTGCCCGCCCCTGGTCTCGGTGCTCGACGAGCTGCCGTCGACC
GCGCCGCTTCCGACCCTCCGTACCCGAATGGCCAACGAGCGCGCCCTGGGGCTGTCGTTCATTTGGGCCGCCCAGACTCG
GCCCCAGCTGACCAGCATCTTCGGTGAGCACGAGGCCCGAGCACTGCTCGGCCTCACCAACGCCCTGGTGATGTTCGGCG
GCTCCAAGGACGTCGCCTTCAACCAGGAGATCTCCGACCTCCTCGGAACGGTCCGCATCGGGCGGGTCACCCACTCCACC
GGCGGAGCCAGTGGCGGTGGGCGCAGCTTCTCCGGCGACGACATCCCGATCATGCGGCCGGAGGAAGTCCGGCAACTGCC
CGAACGCCAAGCTCTGGTCGTCGCCGAGAACGGCAAGCCGATCATCGCCAAGCTGCACCGCTGCGTCGAAGGCAAGGCAG
GGGAGCGCCTGCTGGCCGACCAGCGGGCGCTGCGCGAGCGCCTCACCAACGACCGGCGCATGGTCATCACCCCCGAGGCC
CGAGCCACCGCCGCGCTCGTCGAGGCGCGCCGTCTCGGTTTCGTCGACGACGAGACCGACCACGCAAGGAGTGAACTGTG
A

Upstream 100 bases:

>100_bases
AACTCCTCGGCGAGGCGCGCGACCTGCTGTCCGACGCCTCCTTCCCGCTCCTCGGTCGCCGAGCAGAAGAACGCCATGGC
CGTGCGGTGATCTGCCGTCG

Downstream 100 bases:

>100_bases
CCACCGAGCAGCAGACCCGCCGGGCGGCACCCACGCTGATGGTCTTCCCGTTCCCCGTCCCCGGGGACCATGTCCGGCTC
GCCTACCGCGAGCTCCACAT

Product: Type IV secretory pathway VirD4 components-like protein

Products: NA

Alternate protein names: Conjugative Transfer Gene Complex Protein; Type IV Secretory Pathway; Type IV Secretory Pathway VirD4 Components-Like; TraG-Family Protein; Conjugal Transfer Protein; Type IV Secretory Pathway VirD4 Component; Type IV Secretory Pathway VirD4 Components-Like Protein; TraG-Family Bacterial Conjugation Protein

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MPRPVRGQRSRGGAMKLRFDPWDVGWRIGNAHEPRGGELWVPWDRTAGVIGPQGSGKTLDLLTPALLGAPGAALVTLTKV
EDLLLSLTERSRDDRPCVVLDPFGLAEGVVDELIWDPIAGCVDPKVAERRAKAFTAGTVKGAITGGTGDDAARFYAAESA
KVLQGYFHAAALTGRTLEDVLQWVANPTAATQPMEILRRHPHAEPFWHGLLHGALNGDDRTAGNTVTTVQQAVSLFFQAD
IRRRCIPSPGRPATDLADVIRRRGTIYLLGREDPYASASPLMTAVAEHVLDTGLLLANSSPRGGRLCPPLVSVLDELPST
APLPTLRTRMANERALGLSFIWAAQTRPQLTSIFGEHEARALLGLTNALVMFGGSKDVAFNQEISDLLGTVRIGRVTHST
GGASGGGRSFSGDDIPIMRPEEVRQLPERQALVVAENGKPIIAKLHRCVEGKAGERLLADQRALRERLTNDRRMVITPEA
RATAALVEARRLGFVDDETDHARSEL

Sequences:

>Translated_506_residues
MPRPVRGQRSRGGAMKLRFDPWDVGWRIGNAHEPRGGELWVPWDRTAGVIGPQGSGKTLDLLTPALLGAPGAALVTLTKV
EDLLLSLTERSRDDRPCVVLDPFGLAEGVVDELIWDPIAGCVDPKVAERRAKAFTAGTVKGAITGGTGDDAARFYAAESA
KVLQGYFHAAALTGRTLEDVLQWVANPTAATQPMEILRRHPHAEPFWHGLLHGALNGDDRTAGNTVTTVQQAVSLFFQAD
IRRRCIPSPGRPATDLADVIRRRGTIYLLGREDPYASASPLMTAVAEHVLDTGLLLANSSPRGGRLCPPLVSVLDELPST
APLPTLRTRMANERALGLSFIWAAQTRPQLTSIFGEHEARALLGLTNALVMFGGSKDVAFNQEISDLLGTVRIGRVTHST
GGASGGGRSFSGDDIPIMRPEEVRQLPERQALVVAENGKPIIAKLHRCVEGKAGERLLADQRALRERLTNDRRMVITPEA
RATAALVEARRLGFVDDETDHARSEL
>Mature_505_residues
PRPVRGQRSRGGAMKLRFDPWDVGWRIGNAHEPRGGELWVPWDRTAGVIGPQGSGKTLDLLTPALLGAPGAALVTLTKVE
DLLLSLTERSRDDRPCVVLDPFGLAEGVVDELIWDPIAGCVDPKVAERRAKAFTAGTVKGAITGGTGDDAARFYAAESAK
VLQGYFHAAALTGRTLEDVLQWVANPTAATQPMEILRRHPHAEPFWHGLLHGALNGDDRTAGNTVTTVQQAVSLFFQADI
RRRCIPSPGRPATDLADVIRRRGTIYLLGREDPYASASPLMTAVAEHVLDTGLLLANSSPRGGRLCPPLVSVLDELPSTA
PLPTLRTRMANERALGLSFIWAAQTRPQLTSIFGEHEARALLGLTNALVMFGGSKDVAFNQEISDLLGTVRIGRVTHSTG
GASGGGRSFSGDDIPIMRPEEVRQLPERQALVVAENGKPIIAKLHRCVEGKAGERLLADQRALRERLTNDRRMVITPEAR
ATAALVEARRLGFVDDETDHARSEL

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54650; Mature: 54519

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPVRGQRSRGGAMKLRFDPWDVGWRIGNAHEPRGGELWVPWDRTAGVIGPQGSGKTLD
CCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHH
LLTPALLGAPGAALVTLTKVEDLLLSLTERSRDDRPCVVLDPFGLAEGVVDELIWDPIAG
HHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
CVDPKVAERRAKAFTAGTVKGAITGGTGDDAARFYAAESAKVLQGYFHAAALTGRTLEDV
CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LQWVANPTAATQPMEILRRHPHAEPFWHGLLHGALNGDDRTAGNTVTTVQQAVSLFFQAD
HHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
IRRRCIPSPGRPATDLADVIRRRGTIYLLGREDPYASASPLMTAVAEHVLDTGLLLANSS
HHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCC
PRGGRLCPPLVSVLDELPSTAPLPTLRTRMANERALGLSFIWAAQTRPQLTSIFGEHEAR
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
ALLGLTNALVMFGGSKDVAFNQEISDLLGTVRIGRVTHSTGGASGGGRSFSGDDIPIMRP
HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCH
EEVRQLPERQALVVAENGKPIIAKLHRCVEGKAGERLLADQRALRERLTNDRRMVITPEA
HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCH
RATAALVEARRLGFVDDETDHARSEL
HHHHHHHHHHHCCCCCCCCHHHHCCC
>Mature Secondary Structure 
PRPVRGQRSRGGAMKLRFDPWDVGWRIGNAHEPRGGELWVPWDRTAGVIGPQGSGKTLD
CCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHH
LLTPALLGAPGAALVTLTKVEDLLLSLTERSRDDRPCVVLDPFGLAEGVVDELIWDPIAG
HHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
CVDPKVAERRAKAFTAGTVKGAITGGTGDDAARFYAAESAKVLQGYFHAAALTGRTLEDV
CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LQWVANPTAATQPMEILRRHPHAEPFWHGLLHGALNGDDRTAGNTVTTVQQAVSLFFQAD
HHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
IRRRCIPSPGRPATDLADVIRRRGTIYLLGREDPYASASPLMTAVAEHVLDTGLLLANSS
HHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCC
PRGGRLCPPLVSVLDELPSTAPLPTLRTRMANERALGLSFIWAAQTRPQLTSIFGEHEAR
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
ALLGLTNALVMFGGSKDVAFNQEISDLLGTVRIGRVTHSTGGASGGGRSFSGDDIPIMRP
HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCH
EEVRQLPERQALVVAENGKPIIAKLHRCVEGKAGERLLADQRALRERLTNDRRMVITPEA
HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCH
RATAALVEARRLGFVDDETDHARSEL
HHHHHHHHHHHCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA