| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716467
Identifier: 119716467
GI number: 119716467
Start: 2386561
End: 2387337
Strand: Direct
Name: 119716467
Synonym: Noca_2240
Alternate gene names: NA
Gene position: 2386561-2387337 (Clockwise)
Preceding gene: 119716466
Following gene: 119716468
Centisome position: 47.87
GC content: 71.3
Gene sequence:
>777_bases ATGAAGAACCTGACGACCGGCAACGACGACTCGCCGGCAACCCTGGTGCACATCGGCATCCTGGTGGCGGTCGCCTGCAT GGTGGCCACCGTCGTCTGGCTCGGTGCTCGCACCCGGGCCGACGACGACTCCGGCGGCCCCGACACCACCGGCGGGGACA ACTCGAGCCAGACGGTCGAGAACGCATCGGTCGAGCAGGTCGCACCGGACACCGCACCGGCCGACGGCGTCGTGATCCCG ACCGGCGACGACCAGGTCGACGGCTACCCGACCGGATTCCCGGCCACCGACCTCGGCGCCGTGGCGCTGCAGGTCGAGCT GGCCAAGGCACAGCTCGGGTTCGACTACGACCAGGCCGTCACCGTCGCCCGCCTCTACGCCAACCCCGAGGACAAGGCCG TCTTCGAGGAGCGCTCCCGTGCCGCGGTCGCGCTGCGCCGCCAGCAGGCCGGCGTCGCGAAGGAGGGCGACGTGCCCGCC CCCGCGTCGTACGCCGTCACCCCGGTCGCCTACACCCTCGAGCAGCTCGACACCGGCTACTACGCGGTGAACCTGCTCAG CTACGTCACCCTCACCACCGCCGACGGCCAGGTCAAGGACAGCCTCTACGCCGGCACCCAGCTGATGCGGTGGCTCGACG GTGACTGGCGACTGGTCCAGGGCAGCGAAGCGGACATCGAGCACCTGGTCTCGGAGGGCCAGCCGCAGGCGGTGGCGCCC GGCACCCCCGAGTTCGCGAAGGCCGGCTGGATCCGGATCAACGGAGCTCCCCAGTGA
Upstream 100 bases:
>100_bases CCGCGACCTGGCCTGGCACGCAGCTCGCCCACGAGGCCGGCTGGCGCACCTGGTCGACCGACGACACCACTGACCCTGAC CACATCGAAGGGGACCACTG
Downstream 100 bases:
>100_bases GCACCGTCATCACCGCCGTGCGCCGGGCGAGCCGACTCGGCATCGCGGCCCTGGCGCTCCTGGTGCTCACCACGCTCCTC GGAGCTGCCTCGACCCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKNLTTGNDDSPATLVHIGILVAVACMVATVVWLGARTRADDDSGGPDTTGGDNSSQTVENASVEQVAPDTAPADGVVIP TGDDQVDGYPTGFPATDLGAVALQVELAKAQLGFDYDQAVTVARLYANPEDKAVFEERSRAAVALRRQQAGVAKEGDVPA PASYAVTPVAYTLEQLDTGYYAVNLLSYVTLTTADGQVKDSLYAGTQLMRWLDGDWRLVQGSEADIEHLVSEGQPQAVAP GTPEFAKAGWIRINGAPQ
Sequences:
>Translated_258_residues MKNLTTGNDDSPATLVHIGILVAVACMVATVVWLGARTRADDDSGGPDTTGGDNSSQTVENASVEQVAPDTAPADGVVIP TGDDQVDGYPTGFPATDLGAVALQVELAKAQLGFDYDQAVTVARLYANPEDKAVFEERSRAAVALRRQQAGVAKEGDVPA PASYAVTPVAYTLEQLDTGYYAVNLLSYVTLTTADGQVKDSLYAGTQLMRWLDGDWRLVQGSEADIEHLVSEGQPQAVAP GTPEFAKAGWIRINGAPQ >Mature_258_residues MKNLTTGNDDSPATLVHIGILVAVACMVATVVWLGARTRADDDSGGPDTTGGDNSSQTVENASVEQVAPDTAPADGVVIP TGDDQVDGYPTGFPATDLGAVALQVELAKAQLGFDYDQAVTVARLYANPEDKAVFEERSRAAVALRRQQAGVAKEGDVPA PASYAVTPVAYTLEQLDTGYYAVNLLSYVTLTTADGQVKDSLYAGTQLMRWLDGDWRLVQGSEADIEHLVSEGQPQAVAP GTPEFAKAGWIRINGAPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27094; Mature: 27094
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLTTGNDDSPATLVHIGILVAVACMVATVVWLGARTRADDDSGGPDTTGGDNSSQTVE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH NASVEQVAPDTAPADGVVIPTGDDQVDGYPTGFPATDLGAVALQVELAKAQLGFDYDQAV CCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHHH TVARLYANPEDKAVFEERSRAAVALRRQQAGVAKEGDVPAPASYAVTPVAYTLEQLDTGY HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCH YAVNLLSYVTLTTADGQVKDSLYAGTQLMRWLDGDWRLVQGSEADIEHLVSEGQPQAVAP HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCC GTPEFAKAGWIRINGAPQ CCCHHHHCCEEEECCCCC >Mature Secondary Structure MKNLTTGNDDSPATLVHIGILVAVACMVATVVWLGARTRADDDSGGPDTTGGDNSSQTVE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH NASVEQVAPDTAPADGVVIPTGDDQVDGYPTGFPATDLGAVALQVELAKAQLGFDYDQAV CCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHHH TVARLYANPEDKAVFEERSRAAVALRRQQAGVAKEGDVPAPASYAVTPVAYTLEQLDTGY HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCH YAVNLLSYVTLTTADGQVKDSLYAGTQLMRWLDGDWRLVQGSEADIEHLVSEGQPQAVAP HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCC GTPEFAKAGWIRINGAPQ CCCHHHHCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA