Click here to switch to the map view.

The map label for this gene is cmtR [H]

Identifier: 119716444

GI number: 119716444

Start: 2363803

End: 2364138

Strand: Direct

Name: cmtR [H]

Synonym: Noca_2215

Alternate gene names: 119716444

Gene position: 2363803-2364138 (Clockwise)

Preceding gene: 119716442

Following gene: 119716445

Centisome position: 47.41

GC content: 68.15

Gene sequence:

>336_bases
ATGGTCACCGCCACCGCATCCTCGCTCGATGCCCTCGCCCGATTCGGGCATGCGCTGTCCGATCCGACCCGGGCCCGCAT
CCTCATGCACCTGCGAGTCGCCCCTGCCTATCCGGCTGAGCTCGCCGACGACCTCGGCGTGACCCGACAGTCGATGTCGA
ACCACCTGGGCTGCCTGCGGGGATGTGGCCTGGTTGTCGCAGTCCCCGAGGGTCGGCGTACCCGCTACGAGCTTGCCGAT
GCGCGGCTCGCCCACGCGCTGGCCGACCTGCACGACATCATCCTGGTGACCGATCCCGACGCCTGCACCGAGACTGAAGA
GCAGGAATGCTGCTGA

Upstream 100 bases:

>100_bases
CGCGGTTCTGCAACTGCATCGCGACTCCCATCGGTTTCCGGATCTGACCAGCACAATACATCGTGTCATGAATACAGCAA
GTCATGTACTATCCCGGATC

Downstream 100 bases:

>100_bases
TGGGACACGGACATGGACATAGTCACTCCGCGGCGGCGGGGCACGCCGGCGGCAGGTACCGGTGGCGGCTCGCGGTCACG
TTCGCCATGGTTGCCACCTT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MVTATASSLDALARFGHALSDPTRARILMHLRVAPAYPAELADDLGVTRQSMSNHLGCLRGCGLVVAVPEGRRTRYELAD
ARLAHALADLHDIILVTDPDACTETEEQECC

Sequences:

>Translated_111_residues
MVTATASSLDALARFGHALSDPTRARILMHLRVAPAYPAELADDLGVTRQSMSNHLGCLRGCGLVVAVPEGRRTRYELAD
ARLAHALADLHDIILVTDPDACTETEEQECC
>Mature_111_residues
MVTATASSLDALARFGHALSDPTRARILMHLRVAPAYPAELADDLGVTRQSMSNHLGCLRGCGLVVAVPEGRRTRYELAD
ARLAHALADLHDIILVTDPDACTETEEQECC

Specific function: Metal-responsive transcriptional repressor for the cmt operon. Binding of cadmium or lead causes the repressor to dissociate from the DNA [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11970; Mature: 11970

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTATASSLDALARFGHALSDPTRARILMHLRVAPAYPAELADDLGVTRQSMSNHLGCLR
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GCGLVVAVPEGRRTRYELADARLAHALADLHDIILVTDPDACTETEEQECC
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MVTATASSLDALARFGHALSDPTRARILMHLRVAPAYPAELADDLGVTRQSMSNHLGCLR
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GCGLVVAVPEGRRTRYELADARLAHALADLHDIILVTDPDACTETEEQECC
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]