| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716426
Identifier: 119716426
GI number: 119716426
Start: 2346293
End: 2347246
Strand: Reverse
Name: 119716426
Synonym: Noca_2197
Alternate gene names: NA
Gene position: 2347246-2346293 (Counterclockwise)
Preceding gene: 119716427
Following gene: 119716424
Centisome position: 47.08
GC content: 67.09
Gene sequence:
>954_bases ATGAAGCTCGAGGTGCTGCACGTGACCGACTGCCCGAACGTGCGGCCGATGCTGGACCGGCTGGCCGAGGCCACCGACCT CCCGGTCGCCACACGAGAGGTCACCACTGACACTGAGGCGGCCACACTGGGAATGAACGGGTCGCCGACGCTGCTGATCG ACGGGACCGATCCCTTCGCATGGGCTGATCAATGCGACTGCGGCGTCTCGTGCCGGCTCTACCGCGATCAGGAAGGCCGG ATCGTCCCAGCGCCGTCGGTCGACCAGCTGCGCGAAGCGATAGCCGAAGCGAAGCGAACAGCGCTGGCGCGTTCAGCGGT AGTGCCCGGCGAAGTCCTGAGCGCCTGGCGTAGCAGAGCGGTCCCGCTCGACCCCGTCGAGAAGGCGGTCCACCAGGAAA TCCTGCGCGCTTTCGCGGCGAGGGGACGACCCCCGGCCCCCAGCGAGTTCGACGCCGTGACCGCCGCAGCTGGTCGACCT ACCTCGGAGGTGTTGTCCGCGTTGCATGAGGCAGACGCGATCCGCTTGGACCCCGACGGCGGCATCGCGGTCGCCTACCC GTTCTCGAGCTCGCCTACCCGACACCGGGTCCGGATCGCAGACCGGGTCGAGGTACACGCGATGTGCGCCATCGACGCAC TGGGTATCTCGGCCATGCTCGGCCAGAACACCCGCATCGACTCCTTCGACGTCACGTCCGGCGAACCCATCACCGTGACG ATGACAACAGGTGACGCTACGTGGGAACCGAACCAGGTGGTCGTCTTCGTCGGCGCCACTGCAGGTGGGGGCCCCTCGTC CGACTGCTGCTGCGACTACCTCAACTTCTTCACCGACCGCACTGCAGCCCAAGCTTGGACCTCGGCAAACCCGCACATCC CCGGGCAGATCCTCGATCGGACCGAAGCGCTGGACCTCGCCGTCCGACTGTTCCAACCGCTGCTGGGACGTTGA
Upstream 100 bases:
>100_bases ACGACTCGCTGACCGCCCTGGTGGACACCTGCGAACTTCCCCGGGCTGACCGCACATGCGCTCTGCTCGACGCTCTGACA GTCACACGAGAGGTGGTCCG
Downstream 100 bases:
>100_bases GCATTCCACGACCCTGATCGCGTACTGGATCGACACTGAGCGCTCCGGCACTCCGCTTCAGAGGCCGAGGTCCCGGCTGG TGGTGGTGGCCATCGCCTCA
Product: alkylmercury lyase
Products: NA
Alternate protein names: Alkylmercury Lyase Family Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKLEVLHVTDCPNVRPMLDRLAEATDLPVATREVTTDTEAATLGMNGSPTLLIDGTDPFAWADQCDCGVSCRLYRDQEGR IVPAPSVDQLREAIAEAKRTALARSAVVPGEVLSAWRSRAVPLDPVEKAVHQEILRAFAARGRPPAPSEFDAVTAAAGRP TSEVLSALHEADAIRLDPDGGIAVAYPFSSSPTRHRVRIADRVEVHAMCAIDALGISAMLGQNTRIDSFDVTSGEPITVT MTTGDATWEPNQVVVFVGATAGGGPSSDCCCDYLNFFTDRTAAQAWTSANPHIPGQILDRTEALDLAVRLFQPLLGR
Sequences:
>Translated_317_residues MKLEVLHVTDCPNVRPMLDRLAEATDLPVATREVTTDTEAATLGMNGSPTLLIDGTDPFAWADQCDCGVSCRLYRDQEGR IVPAPSVDQLREAIAEAKRTALARSAVVPGEVLSAWRSRAVPLDPVEKAVHQEILRAFAARGRPPAPSEFDAVTAAAGRP TSEVLSALHEADAIRLDPDGGIAVAYPFSSSPTRHRVRIADRVEVHAMCAIDALGISAMLGQNTRIDSFDVTSGEPITVT MTTGDATWEPNQVVVFVGATAGGGPSSDCCCDYLNFFTDRTAAQAWTSANPHIPGQILDRTEALDLAVRLFQPLLGR >Mature_317_residues MKLEVLHVTDCPNVRPMLDRLAEATDLPVATREVTTDTEAATLGMNGSPTLLIDGTDPFAWADQCDCGVSCRLYRDQEGR IVPAPSVDQLREAIAEAKRTALARSAVVPGEVLSAWRSRAVPLDPVEKAVHQEILRAFAARGRPPAPSEFDAVTAAAGRP TSEVLSALHEADAIRLDPDGGIAVAYPFSSSPTRHRVRIADRVEVHAMCAIDALGISAMLGQNTRIDSFDVTSGEPITVT MTTGDATWEPNQVVVFVGATAGGGPSSDCCCDYLNFFTDRTAAQAWTSANPHIPGQILDRTEALDLAVRLFQPLLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33899; Mature: 33899
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEVLHVTDCPNVRPMLDRLAEATDLPVATREVTTDTEAATLGMNGSPTLLIDGTDPFA CEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCEEEEECCCCCC WADQCDCGVSCRLYRDQEGRIVPAPSVDQLREAIAEAKRTALARSAVVPGEVLSAWRSRA CCCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC VPLDPVEKAVHQEILRAFAARGRPPAPSEFDAVTAAAGRPTSEVLSALHEADAIRLDPDG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCEEECCCC GIAVAYPFSSSPTRHRVRIADRVEVHAMCAIDALGISAMLGQNTRIDSFDVTSGEPITVT CEEEEECCCCCCCCEEEEECCHHEEEHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEE MTTGDATWEPNQVVVFVGATAGGGPSSDCCCDYLNFFTDRTAAQAWTSANPHIPGQILDR EECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH TEALDLAVRLFQPLLGR HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLEVLHVTDCPNVRPMLDRLAEATDLPVATREVTTDTEAATLGMNGSPTLLIDGTDPFA CEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCEEEEECCCCCC WADQCDCGVSCRLYRDQEGRIVPAPSVDQLREAIAEAKRTALARSAVVPGEVLSAWRSRA CCCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC VPLDPVEKAVHQEILRAFAARGRPPAPSEFDAVTAAAGRPTSEVLSALHEADAIRLDPDG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCEEECCCC GIAVAYPFSSSPTRHRVRIADRVEVHAMCAIDALGISAMLGQNTRIDSFDVTSGEPITVT CEEEEECCCCCCCCEEEEECCHHEEEHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEE MTTGDATWEPNQVVVFVGATAGGGPSSDCCCDYLNFFTDRTAAQAWTSANPHIPGQILDR EECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH TEALDLAVRLFQPLLGR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA