| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is caiD [C]
Identifier: 119716358
GI number: 119716358
Start: 2275946
End: 2276941
Strand: Reverse
Name: caiD [C]
Synonym: Noca_2127
Alternate gene names: 119716358
Gene position: 2276941-2275946 (Counterclockwise)
Preceding gene: 119716364
Following gene: 119716357
Centisome position: 45.67
GC content: 63.45
Gene sequence:
>996_bases GTGGCCGGTTCCGGAATCGACATCGTCGTCGCCGACCGGGTGGGGTGGATCCGACTCGACAGACCAGAGGCGTTGAACGC CCTGACCCTCGAAATGGTGACCTCCATGCGAGCAGCTCTCGCGCACTGGGAGACGGATCCGCAGATCGACTCCTACCTAG TCACCGGCGAAGGCCGCGCATTCTGCGCAGGCGGCGACGTGCGGTGGATCGTCGAGGAGATCGCAGAACGGCCCGACAAC GTCCGCGCCTTCTGGCGAGCCGAATATGACCTCGACCTGGCCATCCATCAGCTACATAAACCATACGTCGCAGTCATGGA TGGCATCGTCATGGGAGGCGGAGTAGGTATCTCAGCGCACGGCCGACACCGCATCGTCACCGAACGCACCCGCCTGGCAA TGCCCGAACTACGTATCGGATTCTGCCCAGACGTCGGTGGAACGCGATTGCTCGCCAACGCACCGGGAGAGGTCGGGCTC CACGTTGCTCTCACCTCGGCGTCCCTTGAGGCCGCCGACATCATCTACTGCGGACTCGCCGACCGCGCGATCAACTCTAG GGATCTTCACTCCTTGCTGGAGTCGCCACCCGGCGTCCTTCGGCTTGCCCAACAGCACCAAGAACCACCGTGTCCGTCCC TTGCCGCGCAGCGCCCCTGGATTGACGAGTGCTACTCAGCGCCCACGGTCGAGCTCATCCTTGAACGACTCCGATCGCAC CCCCAGCAGCTCGCCAGAAACGCAGCCACCATCATTGAGTCGCAGCCACCGACCGCGCTCAAGGTAGCCCTGCGAGCACT ACGCACCGCTCGTCAGGCATCGGACCTCGCGGAGGTGCTAGCCATGGAGTTCGGGATTGTTAGCCGCAGTCTCATTCATC ACGACTTCACCGAAGGAATCCGGGCAAGGATGGTCGAGAAGCGCTCCCCGGTCTGGCAGCCCGCCACGTTGTCGGAGGTC ACCGACGCCGCGGTAGCTGAGTTCTTCGACTCCTAG
Upstream 100 bases:
>100_bases TTAGGTAACACACTCGCACTCCGCAAGAAGTTATAAAGAATCACTATTCTTGATGGGCGTGTCGGCCCCCAGCCGACCTT CGACCGAAGTGGAGAGCGCT
Downstream 100 bases:
>100_bases TCGTCGCATGCGTGCAAGCGCTCGGCGAGGAGAACCAAGGCGTCGCCGGGCTCATCCAACATGGCGCGGCCATCATCGTG ACGGAATCGACGGCATCTTT
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MAGSGIDIVVADRVGWIRLDRPEALNALTLEMVTSMRAALAHWETDPQIDSYLVTGEGRAFCAGGDVRWIVEEIAERPDN VRAFWRAEYDLDLAIHQLHKPYVAVMDGIVMGGGVGISAHGRHRIVTERTRLAMPELRIGFCPDVGGTRLLANAPGEVGL HVALTSASLEAADIIYCGLADRAINSRDLHSLLESPPGVLRLAQQHQEPPCPSLAAQRPWIDECYSAPTVELILERLRSH PQQLARNAATIIESQPPTALKVALRALRTARQASDLAEVLAMEFGIVSRSLIHHDFTEGIRARMVEKRSPVWQPATLSEV TDAAVAEFFDS
Sequences:
>Translated_331_residues MAGSGIDIVVADRVGWIRLDRPEALNALTLEMVTSMRAALAHWETDPQIDSYLVTGEGRAFCAGGDVRWIVEEIAERPDN VRAFWRAEYDLDLAIHQLHKPYVAVMDGIVMGGGVGISAHGRHRIVTERTRLAMPELRIGFCPDVGGTRLLANAPGEVGL HVALTSASLEAADIIYCGLADRAINSRDLHSLLESPPGVLRLAQQHQEPPCPSLAAQRPWIDECYSAPTVELILERLRSH PQQLARNAATIIESQPPTALKVALRALRTARQASDLAEVLAMEFGIVSRSLIHHDFTEGIRARMVEKRSPVWQPATLSEV TDAAVAEFFDS >Mature_330_residues AGSGIDIVVADRVGWIRLDRPEALNALTLEMVTSMRAALAHWETDPQIDSYLVTGEGRAFCAGGDVRWIVEEIAERPDNV RAFWRAEYDLDLAIHQLHKPYVAVMDGIVMGGGVGISAHGRHRIVTERTRLAMPELRIGFCPDVGGTRLLANAPGEVGLH VALTSASLEAADIIYCGLADRAINSRDLHSLLESPPGVLRLAQQHQEPPCPSLAAQRPWIDECYSAPTVELILERLRSHP QQLARNAATIIESQPPTALKVALRALRTARQASDLAEVLAMEFGIVSRSLIHHDFTEGIRARMVEKRSPVWQPATLSEVT DAAVAEFFDS
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=334, Percent_Identity=38.622754491018, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI37594469, Length=286, Percent_Identity=38.4615384615385, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI194097323, Length=188, Percent_Identity=28.7234042553192, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI68989263, Length=239, Percent_Identity=24.6861924686192, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI221142681, Length=191, Percent_Identity=28.2722513089005, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1787659, Length=171, Percent_Identity=26.9005847953216, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788682, Length=187, Percent_Identity=27.807486631016, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25144160, Length=330, Percent_Identity=36.6666666666667, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI25144157, Length=330, Percent_Identity=36.6666666666667, Blast_Score=211, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17554946, Length=171, Percent_Identity=29.2397660818713, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536985, Length=192, Percent_Identity=26.0416666666667, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI25145438, Length=304, Percent_Identity=25.6578947368421, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=345, Percent_Identity=28.9855072463768, Blast_Score=134, Evalue=1e-32, Organism=Drosophila melanogaster, GI28571730, Length=325, Percent_Identity=39.6923076923077, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI28571729, Length=325, Percent_Identity=39.6923076923077, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI20129971, Length=177, Percent_Identity=26.5536723163842, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24653477, Length=177, Percent_Identity=26.5536723163842, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 36265; Mature: 36134
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSGIDIVVADRVGWIRLDRPEALNALTLEMVTSMRAALAHWETDPQIDSYLVTGEGRA CCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEE FCAGGDVRWIVEEIAERPDNVRAFWRAEYDLDLAIHQLHKPYVAVMDGIVMGGGVGISAH EECCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCEECCC GRHRIVTERTRLAMPELRIGFCPDVGGTRLLANAPGEVGLHVALTSASLEAADIIYCGLA CCCEEEHHHHHHCCCCCCEECCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHEEEECCH DRAINSRDLHSLLESPPGVLRLAQQHQEPPCPSLAAQRPWIDECYSAPTVELILERLRSH HHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH PQQLARNAATIIESQPPTALKVALRALRTARQASDLAEVLAMEFGIVSRSLIHHDFTEGI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARMVEKRSPVWQPATLSEVTDAAVAEFFDS HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AGSGIDIVVADRVGWIRLDRPEALNALTLEMVTSMRAALAHWETDPQIDSYLVTGEGRA CCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEE FCAGGDVRWIVEEIAERPDNVRAFWRAEYDLDLAIHQLHKPYVAVMDGIVMGGGVGISAH EECCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCEECCC GRHRIVTERTRLAMPELRIGFCPDVGGTRLLANAPGEVGLHVALTSASLEAADIIYCGLA CCCEEEHHHHHHCCCCCCEECCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHEEEECCH DRAINSRDLHSLLESPPGVLRLAQQHQEPPCPSLAAQRPWIDECYSAPTVELILERLRSH HHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH PQQLARNAATIIESQPPTALKVALRALRTARQASDLAEVLAMEFGIVSRSLIHHDFTEGI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARMVEKRSPVWQPATLSEVTDAAVAEFFDS HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA