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The map label for this gene is IS1086 [H]

Identifier: 119716357

GI number: 119716357

Start: 2274395

End: 2274859

Strand: Reverse

Name: IS1086 [H]

Synonym: Noca_2126

Alternate gene names: 119716357

Gene position: 2274859-2274395 (Counterclockwise)

Preceding gene: 119716358

Following gene: 119716355

Centisome position: 45.63

GC content: 64.3

Gene sequence:

>465_bases
GTGCCGGGCCACTTTGAAGGCGACCTGGTCTTCGGCATGAAACATGAGCCCGGTCGTCACGCTGGTCGAGCGGTCGACTC
GATTCCTGATGCCTGGTCGCGCTGCCCGATGGCAACCACAAGGCCGACACGGTGGCCGACGCACTTGACGCCGCGGATCG
CTACCTTGCCGAGGCACCTGGCCAGGTCGCTGACCCGGGACCAGGGCCACGAGATGGCTGCGCCCCGCAGGTTCACCGAC
ACCACCGGGATCCGGGTCCACTTCTGTGATGCGAAGTCGCCGTGGCAGCGCGGAAGCAATGAGAACACCAACGACCTGCT
GCGTCAGTACCGGCCTCGACGGCTCGACTTCCGCATCTTCACCCAAGCCGACTTCGACGCCATCGCCCAAGAGCTCAACG
AACGACCTCGACAGACCCTCGAGTTCAAGACACCATCACCAGCACTCGCCGAGCTGTTGCCTTGA

Upstream 100 bases:

>100_bases
GATCCGTCGCCCTCCGGGTGTCCGGCTTCCCGATGGTCGTGGCGGACGACCGGGCATCCTCACCGTCTACGAACGCCCGG
CCAAGGTCGAGGACCGTGCC

Downstream 100 bases:

>100_bases
CCGCCTGAACCCGCAGGCATGACAGGGCGCTTCCGCCCGGCCTGGTGCCTACTCCCCCGCGATCGACAACCGAGGGCCGC
AACCGTCGATCGACGTCGAC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPGHFEGDLVFGMKHEPGRHAGRAVDSIPDAWSRCPMATTRPTRWPTHLTPRIATLPRHLARSLTRDQGHEMAAPRRFTD
TTGIRVHFCDAKSPWQRGSNENTNDLLRQYRPRRLDFRIFTQADFDAIAQELNERPRQTLEFKTPSPALAELLP

Sequences:

>Translated_154_residues
MPGHFEGDLVFGMKHEPGRHAGRAVDSIPDAWSRCPMATTRPTRWPTHLTPRIATLPRHLARSLTRDQGHEMAAPRRFTD
TTGIRVHFCDAKSPWQRGSNENTNDLLRQYRPRRLDFRIFTQADFDAIAQELNERPRQTLEFKTPSPALAELLP
>Mature_153_residues
PGHFEGDLVFGMKHEPGRHAGRAVDSIPDAWSRCPMATTRPTRWPTHLTPRIATLPRHLARSLTRDQGHEMAAPRRFTDT
TGIRVHFCDAKSPWQRGSNENTNDLLRQYRPRRLDFRIFTQADFDAIAQELNERPRQTLEFKTPSPALAELLP

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=147, Percent_Identity=42.8571428571429, Blast_Score=120, Evalue=3e-29,
Organism=Escherichia coli, GI1790736, Length=147, Percent_Identity=42.8571428571429, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI1787671, Length=147, Percent_Identity=42.8571428571429, Blast_Score=120, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 17706; Mature: 17575

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGHFEGDLVFGMKHEPGRHAGRAVDSIPDAWSRCPMATTRPTRWPTHLTPRIATLPRHL
CCCCCCCCEEECCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
ARSLTRDQGHEMAAPRRFTDTTGIRVHFCDAKSPWQRGSNENTNDLLRQYRPRRLDFRIF
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHCCCCCCCEEEE
TQADFDAIAQELNERPRQTLEFKTPSPALAELLP
CCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHCC
>Mature Secondary Structure 
PGHFEGDLVFGMKHEPGRHAGRAVDSIPDAWSRCPMATTRPTRWPTHLTPRIATLPRHL
CCCCCCCEEECCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
ARSLTRDQGHEMAAPRRFTDTTGIRVHFCDAKSPWQRGSNENTNDLLRQYRPRRLDFRIF
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHCCCCCCCEEEE
TQADFDAIAQELNERPRQTLEFKTPSPALAELLP
CCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]