| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716339
Identifier: 119716339
GI number: 119716339
Start: 2252736
End: 2255084
Strand: Reverse
Name: 119716339
Synonym: Noca_2108
Alternate gene names: NA
Gene position: 2255084-2252736 (Counterclockwise)
Preceding gene: 119716340
Following gene: 119716338
Centisome position: 45.23
GC content: 72.29
Gene sequence:
>2349_bases GTGCACGCACCCGCTCGCCCGTCCCGCTTCGCCGCCGTCCTGGCGGCGGCGTTCTCGCTCGTCGTCGCCGGCCTGGTCGC CACCGGCTCCGGCGCACAGGCCGCGGAGGACACCTTCACCGTCGCCGGCAGCGCGCGCCAGGTGTACGCCGTCGGGCTGC CGGCCGGGTCGCAGGCAACCCTGGTCGACGGCGCCGGTGACGAGGTCCGGACCCAGGCCGTCAACGAGCTGGGCGGCGTG CTGTTCCGCCACGTCAGGCCGGGCTCCGGCTACGTGGTGCGGGCGGCGTCCGGGACGGCCTCCGACCCGCTCACCGTGCA CGGCAACAGCGCGAAGCAGTGGAACGAGAGCATCTACGACCAGACGATCCCCAGCGACGGCTACGGCTACCTGACCACCC GCGACGGCACGAAGCTCGCCTACTCCGTGCACCCGCCGACCGACCTCGGCGGCGTCGCGGGCGGCGGCACGCTGCCGGAC CTCCCGACCGACGCGCCGTTCCCCACCCTGATCGAGTACTCCGGCTACGGGTACGCCAACCCGGCCGGCCCCGACAGCGG CATCGCCGCGGTCGCCAACGCGATGGGCTTCGCGGTCGTCGACATCCAGATGCGCGGCACCGGCTGCTCGGGCGGCGCCT TCGACTTCTTCGAGCCGCTCCAGTCCATCGACGGCTACGACATCGTCGAGACCGTCGCGCGCCAGCCGTGGGTCCAGGGC GGCAAGGTCGGGATGGTGGGCATCTCGTACGGCGGCATCAGCCAGCTGTTCACCGCGCAGACCCGGCCGCCGCACCTCGC CGCGATCTCACCACTGTCGGTCATCGACGCGACCGCGACCACGCTCTACCCCGGCGGCATCCTCAACACCGGCTTCGCGG TCGCCTGGGCCAAGGAGCGCCAGCAGCAGGCCCAGCCGGCCGGCACCGGCGCCGAGGGCACCCAGGCGTACGCCGAGCAG CGGATCACCGACGGCGACCAGACCTGCCAGGACAACCAGGTGCTGCACCCCGAGGCCGCCGACCTGATGACCAAGATCAA GCAGAACAGCCACTACCGCCCACGGGTGGCCGACCCGCTCGACCCGGTCTCGTTCGTGCACAAGATCACCGTGCCCACCT TCATGGCCTGCCAGTTCCAGGACGAGCAGACCGGCGGCCACTGCCCGGCACTGGTGCGGAACTTCACCGGGACCGACAAG TTGTGGTTCACGTTCACCAACGGCGCCCACATCGACTCCCTCGACCCGGAGACGCTCAACCGCCTCTACGACTTCTTGAT GCTCTACGTCGCCGACGCGGCGCCGATCCAGAACTCCGCCCTGATCCAGCTCGCCGCGCCGGCCGTCTACCAGCAGGCGA TGGGCATCTCGAGCGACCCGATCACGCTGCCACCGGACCCGGTCCAGCAGCAGCCGACGTACGACGCGGCGCTCGCGGAG TTCGAGAAGGCTCCGCCCGTGCGGGTGCTGTTCGACAACGGTGCGGGCGCCTCCCCGACCGGCACCCAGAGCCCCGGTGA CCCCTACCCCGCCTACGAGAAGTCCTTCGAGTCCCTGCCCGTGCCCGGCACCAAGGCGACGTCGTGGTACCTCGGCGGCG GCAGCGCGCTGAGCGCGAAGGCGCCGACCCGGCCGAGCGTGGACCGCTACACCTCCGACCCGCGGGCCCTGGCCGGCAAC GACTTCACCGGCAGCACCAGCGGCGGGGGCCTCTGGGGCAACGCCGCCCAGTGGAGCTGGGACTGGCAGCAGCGGGCCCA CGGCACCGCGGTCTCCTACGTCTCACCCGAGCTGACCGAGGACCTGACGACCGTCGGCGCCGGCGCGGTCCACCTGTGGG TGCGCTCGTCGGCCCGCGACGTCGACTTCCAGGCGACGGTCAGCGAGGTCCGGGACGGGAAGGAGACGTTCGTGCAGAGC GGCTGGCTGCGCGGCAGCGAGCGCAAGCTCGCCACCACGGCCGACAACATCATGAAGCAGCAGCCCAGCCTGCTCCAGCC GATCCCCACGTTCCGCGCCGCGGACGTCCGGCCGCTGCCCGCCCACCGCTGGACGAAGGTCGTGATCCCCCTCTACTACC AGGGCCACGCCTACCGGAAGGGCTCGCAGATCCGGGTCACGATCTCGGCGCCGGGTGGCGAGCAGCCGATCTGGTCCTTC GCCGAGGCCCGTCCGCAGGGCAGGGCGGCAACCGTCCAGGTCGCGTCGTCGCGGCGGCACCCGTCCCGGCTGATCCTCCC GGTCGTCCCCGGCGTCACGATCGACTCCGAGGCGCCCCCGTGCCCGAGCCTGCGCAACCAGCCGTGCCGGGACTACGTGC CGTTCGAGAACCAGCCCGGCCGGGGCTAG
Upstream 100 bases:
>100_bases ACCTCGAGGCCTGCCGCGTCTGCCGGCCTCCCCAGTTCGGGCGGTTGGTCGACGGCACGCTCCGTCTGAGCGCCTCGGTC TAGCCCACAGGAGATCCGCC
Downstream 100 bases:
>100_bases GAAGGCGGACCACAGGGCGCCAGACTGGCCGGGTGACCGACGACCTCGCGGACCCGAAGGCGGCCCTGAAGCACTACCTC CAACGCAACCGCGAGGCGTT
Product: peptidase S15
Products: NA
Alternate protein names: X-Pro Dipeptidyl-Peptidase Domain-Containing Protein; Hydrolase CocE/NonD Family Protein; Esterase; X-Pro Dipeptidyl-Peptidase Domain Protein; Acyl Esterase; Hydrolase; Hydrolase CocE/NonD Family; Xaa-Pro Dipeptidyl-Peptidase Peptidase Family S; Peptidase; X-Pro Dipeptidyl-Peptidase
Number of amino acids: Translated: 782; Mature: 782
Protein sequence:
>782_residues MHAPARPSRFAAVLAAAFSLVVAGLVATGSGAQAAEDTFTVAGSARQVYAVGLPAGSQATLVDGAGDEVRTQAVNELGGV LFRHVRPGSGYVVRAASGTASDPLTVHGNSAKQWNESIYDQTIPSDGYGYLTTRDGTKLAYSVHPPTDLGGVAGGGTLPD LPTDAPFPTLIEYSGYGYANPAGPDSGIAAVANAMGFAVVDIQMRGTGCSGGAFDFFEPLQSIDGYDIVETVARQPWVQG GKVGMVGISYGGISQLFTAQTRPPHLAAISPLSVIDATATTLYPGGILNTGFAVAWAKERQQQAQPAGTGAEGTQAYAEQ RITDGDQTCQDNQVLHPEAADLMTKIKQNSHYRPRVADPLDPVSFVHKITVPTFMACQFQDEQTGGHCPALVRNFTGTDK LWFTFTNGAHIDSLDPETLNRLYDFLMLYVADAAPIQNSALIQLAAPAVYQQAMGISSDPITLPPDPVQQQPTYDAALAE FEKAPPVRVLFDNGAGASPTGTQSPGDPYPAYEKSFESLPVPGTKATSWYLGGGSALSAKAPTRPSVDRYTSDPRALAGN DFTGSTSGGGLWGNAAQWSWDWQQRAHGTAVSYVSPELTEDLTTVGAGAVHLWVRSSARDVDFQATVSEVRDGKETFVQS GWLRGSERKLATTADNIMKQQPSLLQPIPTFRAADVRPLPAHRWTKVVIPLYYQGHAYRKGSQIRVTISAPGGEQPIWSF AEARPQGRAATVQVASSRRHPSRLILPVVPGVTIDSEAPPCPSLRNQPCRDYVPFENQPGRG
Sequences:
>Translated_782_residues MHAPARPSRFAAVLAAAFSLVVAGLVATGSGAQAAEDTFTVAGSARQVYAVGLPAGSQATLVDGAGDEVRTQAVNELGGV LFRHVRPGSGYVVRAASGTASDPLTVHGNSAKQWNESIYDQTIPSDGYGYLTTRDGTKLAYSVHPPTDLGGVAGGGTLPD LPTDAPFPTLIEYSGYGYANPAGPDSGIAAVANAMGFAVVDIQMRGTGCSGGAFDFFEPLQSIDGYDIVETVARQPWVQG GKVGMVGISYGGISQLFTAQTRPPHLAAISPLSVIDATATTLYPGGILNTGFAVAWAKERQQQAQPAGTGAEGTQAYAEQ RITDGDQTCQDNQVLHPEAADLMTKIKQNSHYRPRVADPLDPVSFVHKITVPTFMACQFQDEQTGGHCPALVRNFTGTDK LWFTFTNGAHIDSLDPETLNRLYDFLMLYVADAAPIQNSALIQLAAPAVYQQAMGISSDPITLPPDPVQQQPTYDAALAE FEKAPPVRVLFDNGAGASPTGTQSPGDPYPAYEKSFESLPVPGTKATSWYLGGGSALSAKAPTRPSVDRYTSDPRALAGN DFTGSTSGGGLWGNAAQWSWDWQQRAHGTAVSYVSPELTEDLTTVGAGAVHLWVRSSARDVDFQATVSEVRDGKETFVQS GWLRGSERKLATTADNIMKQQPSLLQPIPTFRAADVRPLPAHRWTKVVIPLYYQGHAYRKGSQIRVTISAPGGEQPIWSF AEARPQGRAATVQVASSRRHPSRLILPVVPGVTIDSEAPPCPSLRNQPCRDYVPFENQPGRG >Mature_782_residues MHAPARPSRFAAVLAAAFSLVVAGLVATGSGAQAAEDTFTVAGSARQVYAVGLPAGSQATLVDGAGDEVRTQAVNELGGV LFRHVRPGSGYVVRAASGTASDPLTVHGNSAKQWNESIYDQTIPSDGYGYLTTRDGTKLAYSVHPPTDLGGVAGGGTLPD LPTDAPFPTLIEYSGYGYANPAGPDSGIAAVANAMGFAVVDIQMRGTGCSGGAFDFFEPLQSIDGYDIVETVARQPWVQG GKVGMVGISYGGISQLFTAQTRPPHLAAISPLSVIDATATTLYPGGILNTGFAVAWAKERQQQAQPAGTGAEGTQAYAEQ RITDGDQTCQDNQVLHPEAADLMTKIKQNSHYRPRVADPLDPVSFVHKITVPTFMACQFQDEQTGGHCPALVRNFTGTDK LWFTFTNGAHIDSLDPETLNRLYDFLMLYVADAAPIQNSALIQLAAPAVYQQAMGISSDPITLPPDPVQQQPTYDAALAE FEKAPPVRVLFDNGAGASPTGTQSPGDPYPAYEKSFESLPVPGTKATSWYLGGGSALSAKAPTRPSVDRYTSDPRALAGN DFTGSTSGGGLWGNAAQWSWDWQQRAHGTAVSYVSPELTEDLTTVGAGAVHLWVRSSARDVDFQATVSEVRDGKETFVQS GWLRGSERKLATTADNIMKQQPSLLQPIPTFRAADVRPLPAHRWTKVVIPLYYQGHAYRKGSQIRVTISAPGGEQPIWSF AEARPQGRAATVQVASSRRHPSRLILPVVPGVTIDSEAPPCPSLRNQPCRDYVPFENQPGRG
Specific function: Unknown
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82997; Mature: 82997
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPARPSRFAAVLAAAFSLVVAGLVATGSGAQAAEDTFTVAGSARQVYAVGLPAGSQAT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEE LVDGAGDEVRTQAVNELGGVLFRHVRPGSGYVVRAASGTASDPLTVHGNSAKQWNESIYD EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHH QTIPSDGYGYLTTRDGTKLAYSVHPPTDLGGVAGGGTLPDLPTDAPFPTLIEYSGYGYAN HCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC PAGPDSGIAAVANAMGFAVVDIQMRGTGCSGGAFDFFEPLQSIDGYDIVETVARQPWVQG CCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC GKVGMVGISYGGISQLFTAQTRPPHLAAISPLSVIDATATTLYPGGILNTGFAVAWAKER CCEEEEEECCCCHHHHHHCCCCCCCEEECCCHHHHHHHHHEECCCCCCCCCEEEEEHHHH QQQAQPAGTGAEGTQAYAEQRITDGDQTCQDNQVLHPEAADLMTKIKQNSHYRPRVADPL HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCC DPVSFVHKITVPTFMACQFQDEQTGGHCPALVRNFTGTDKLWFTFTNGAHIDSLDPETLN CHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHH RLYDFLMLYVADAAPIQNSALIQLAAPAVYQQAMGISSDPITLPPDPVQQQPTYDAALAE HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH FEKAPPVRVLFDNGAGASPTGTQSPGDPYPAYEKSFESLPVPGTKATSWYLGGGSALSAK HHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCEECCC APTRPSVDRYTSDPRALAGNDFTGSTSGGGLWGNAAQWSWDWQQRAHGTAVSYVSPELTE CCCCCCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCHHHH DLTTVGAGAVHLWVRSSARDVDFQATVSEVRDGKETFVQSGWLRGSERKLATTADNIMKQ HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHC QPSLLQPIPTFRAADVRPLPAHRWTKVVIPLYYQGHAYRKGSQIRVTISAPGGEQPIWSF CCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCEEEEEEECCCCCCCHHHH AEARPQGRAATVQVASSRRHPSRLILPVVPGVTIDSEAPPCPSLRNQPCRDYVPFENQPG HHCCCCCCEEEEEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC RG CC >Mature Secondary Structure MHAPARPSRFAAVLAAAFSLVVAGLVATGSGAQAAEDTFTVAGSARQVYAVGLPAGSQAT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEE LVDGAGDEVRTQAVNELGGVLFRHVRPGSGYVVRAASGTASDPLTVHGNSAKQWNESIYD EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHH QTIPSDGYGYLTTRDGTKLAYSVHPPTDLGGVAGGGTLPDLPTDAPFPTLIEYSGYGYAN HCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC PAGPDSGIAAVANAMGFAVVDIQMRGTGCSGGAFDFFEPLQSIDGYDIVETVARQPWVQG CCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC GKVGMVGISYGGISQLFTAQTRPPHLAAISPLSVIDATATTLYPGGILNTGFAVAWAKER CCEEEEEECCCCHHHHHHCCCCCCCEEECCCHHHHHHHHHEECCCCCCCCCEEEEEHHHH QQQAQPAGTGAEGTQAYAEQRITDGDQTCQDNQVLHPEAADLMTKIKQNSHYRPRVADPL HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCC DPVSFVHKITVPTFMACQFQDEQTGGHCPALVRNFTGTDKLWFTFTNGAHIDSLDPETLN CHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHH RLYDFLMLYVADAAPIQNSALIQLAAPAVYQQAMGISSDPITLPPDPVQQQPTYDAALAE HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH FEKAPPVRVLFDNGAGASPTGTQSPGDPYPAYEKSFESLPVPGTKATSWYLGGGSALSAK HHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCEECCC APTRPSVDRYTSDPRALAGNDFTGSTSGGGLWGNAAQWSWDWQQRAHGTAVSYVSPELTE CCCCCCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCHHHH DLTTVGAGAVHLWVRSSARDVDFQATVSEVRDGKETFVQSGWLRGSERKLATTADNIMKQ HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHC QPSLLQPIPTFRAADVRPLPAHRWTKVVIPLYYQGHAYRKGSQIRVTISAPGGEQPIWSF CCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCEEEEEEECCCCCCCHHHH AEARPQGRAATVQVASSRRHPSRLILPVVPGVTIDSEAPPCPSLRNQPCRDYVPFENQPG HHCCCCCCEEEEEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC RG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA