| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716340
Identifier: 119716340
GI number: 119716340
Start: 2255102
End: 2255632
Strand: Reverse
Name: 119716340
Synonym: Noca_2109
Alternate gene names: NA
Gene position: 2255632-2255102 (Counterclockwise)
Preceding gene: 119716341
Following gene: 119716339
Centisome position: 45.24
GC content: 72.32
Gene sequence:
>531_bases ATGTCGAACCTGTCCCCGAACCTCTCCCTGCCCCCGCTGCCCGGCCGGAACCATCTGGGCAAGCTGGGCGGCCAGCTCGG CGTCCTGCTGTGCCTGGTCGGGTTCCTCGTGATGTTCTTCGGCTGGAACGGCGCCGCCAGCCACAACTTCGTGCCCGCGC AGTTCCCGTTCCTGATCTCGGGCGGCATGGTCGGCCTGGGGGTCGTGGTGCTCGGCTCCGCGCTCGTCCTGGTCCAGAAC CAGCGCGCCGACATGGCCCGGCTGGAGGCGGCACTCGAACGCGTCGCCCTCGCCGTGGAGCGGCAGGGCGGGACCTCCGC CGGGACACCGACCAGCCTGGCGGGGTACGTCGTCGCCGGCGGCTCGTCGTACCACCAGCCGGACTGCACGCTGCCCGAGG CCCGGACCGAGGCGCACATGATCCCCTTGGCCGACGTCGCCGGCAGCAACCTCGAGGCCTGCCGCGTCTGCCGGCCTCCC CAGTTCGGGCGGTTGGTCGACGGCACGCTCCGTCTGAGCGCCTCGGTCTAG
Upstream 100 bases:
>100_bases CCCTGGTCATGGAGAAGGGCACCCTCGTCCACACCGCCGTGGGTGACGAGATCCGCAACGTCGACCTCCGTGAGGCCTAC CTCGGAGCTTAGGAGCCACC
Downstream 100 bases:
>100_bases CCCACAGGAGATCCGCCGTGCACGCACCCGCTCGCCCGTCCCGCTTCGCCGCCGTCCTGGCGGCGGCGTTCTCGCTCGTC GTCGCCGGCCTGGTCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSNLSPNLSLPPLPGRNHLGKLGGQLGVLLCLVGFLVMFFGWNGAASHNFVPAQFPFLISGGMVGLGVVVLGSALVLVQN QRADMARLEAALERVALAVERQGGTSAGTPTSLAGYVVAGGSSYHQPDCTLPEARTEAHMIPLADVAGSNLEACRVCRPP QFGRLVDGTLRLSASV
Sequences:
>Translated_176_residues MSNLSPNLSLPPLPGRNHLGKLGGQLGVLLCLVGFLVMFFGWNGAASHNFVPAQFPFLISGGMVGLGVVVLGSALVLVQN QRADMARLEAALERVALAVERQGGTSAGTPTSLAGYVVAGGSSYHQPDCTLPEARTEAHMIPLADVAGSNLEACRVCRPP QFGRLVDGTLRLSASV >Mature_175_residues SNLSPNLSLPPLPGRNHLGKLGGQLGVLLCLVGFLVMFFGWNGAASHNFVPAQFPFLISGGMVGLGVVVLGSALVLVQNQ RADMARLEAALERVALAVERQGGTSAGTPTSLAGYVVAGGSSYHQPDCTLPEARTEAHMIPLADVAGSNLEACRVCRPPQ FGRLVDGTLRLSASV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18261; Mature: 18130
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSPNLSLPPLPGRNHLGKLGGQLGVLLCLVGFLVMFFGWNGAASHNFVPAQFPFLIS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE GGMVGLGVVVLGSALVLVQNQRADMARLEAALERVALAVERQGGTSAGTPTSLAGYVVAG CCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC GSSYHQPDCTLPEARTEAHMIPLADVAGSNLEACRVCRPPQFGRLVDGTLRLSASV CCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCHHHHCCCCCCCCCEECCEEEEEECC >Mature Secondary Structure SNLSPNLSLPPLPGRNHLGKLGGQLGVLLCLVGFLVMFFGWNGAASHNFVPAQFPFLIS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE GGMVGLGVVVLGSALVLVQNQRADMARLEAALERVALAVERQGGTSAGTPTSLAGYVVAG CCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC GSSYHQPDCTLPEARTEAHMIPLADVAGSNLEACRVCRPPQFGRLVDGTLRLSASV CCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCHHHHCCCCCCCCCEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA