Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716333

Identifier: 119716333

GI number: 119716333

Start: 2246479

End: 2247615

Strand: Reverse

Name: 119716333

Synonym: Noca_2102

Alternate gene names: NA

Gene position: 2247615-2246479 (Counterclockwise)

Preceding gene: 119716334

Following gene: 119716332

Centisome position: 45.08

GC content: 75.11

Gene sequence:

>1137_bases
GTGACAAACGCCGCCCCGCCGCGACCGAGCTCGACACGCGCCGGCACCCCACGCGGGCTCCTCCTGCTCCCCGCCGGCCT
GGCGATGCTCGCCGGGCTCGACGCCGCGCTGCTCCTCCTCGGGGTGCCGGCGCCGGTGACCACCGACCGGCTTCCCGACG
TGCACGGCATGTTGATGGTGCTCGGCTTCGTCGGCACCCTGGTCTGCCTCGAGCGCTCCGTGGCCCTGGGCCGCCCGCTC
GGCTACCTCGCGCCGGCGCTGCTCGGCGCCGGCGGCCTGCTGCTGCTCGCCCCGGTCCCGCTCGCGGTCGGGCGCACCGG
CCTCTTGCTGGGGATGCTGGCGATGTCGCTCCTCTACGTGCCGCTCTGGCGTCGCCAGCGCGACGATGCCGTGCTCGTCC
AGGCCCTCGGCGCGGTGCTCGGCGCCGGCGCCGCCGCGATGTGGCTCGGCGGCGCGCAGACCGCTCTCCTGGTGCCGTGG
CTGGCCGGCTTCCTGGTGCTGACCATCGCCGGCGAGCGGCTCGAGCTGGCCCGGCTCGCGATGGGACCGAAGGCCGGCCC
GACGCTCGTGCTGCTGTGCCTCACCGTGATGGCGGCGACAGTCGGCTCGCTGCTGTGGCCGGACGTCGGCTATCCGCTGG
TCGGCCTCGCCCTGGCCGCCCTCACCGGCTGGCTGGTCGCCCACGACGTCGCCTGGCGGACCGTCCGCCGGGCCGGGCTG
ACCCGGTTCATGGCAGCCAGCATGCTGGCCGGGTACTTCTGGCTGCTGGTCGCCGCCGGCACCTGGCTGCTGCACGGCAG
CGCGCTCTCGGGCGCGCCGTACGACGTCGTCATCCACGCCACGTTCCTGGGCTTCACGATCTCGATGATCATGGCGCACG
CGCCCGTGATCCTCCCGGCCGTGTTGCGTCGCCCGCTGCCGTACCGGACCGTGCTCTGGGCGCCGCTCGTGGTGCTGCAC
GCCTCGCTGGTGCTGCGGCTCTGGATCGGTGACGCCCTCGGGGCGCACCTCGCCTGGCAGATCGGCGGGGCCGCGAACGT
GGTCGCGCTGCTGTCCTTCTTCGCGCTCGCCGCGTGGTCCGTGCTGGCCGCGGCCCGGCGTCCCAGCACCGTTCCCGCCA
AGGAGCGGGCCGCATGA

Upstream 100 bases:

>100_bases
CGGGCCGGGATCGGCGTCTTGAGCCTGGCGCTGCTGGTGCTCGGCGTCGCGATCGCGGCGTGAACTCGCTCCGCGGTCGC
GCCTTAGATACGATTCTGTC

Downstream 100 bases:

>100_bases
CCGTCATCGGGACCAGGAGCCGGCCGGTCGGCTCGGGCGCACGCCGGGGCTTCTCGCCGCTGCGCGACCTCCCCGCTCTG
CTCTGGCTCATCGCCGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMVLGFVGTLVCLERSVALGRPL
GYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYVPLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPW
LAGFLVLTIAGERLELARLAMGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL
TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPAVLRRPLPYRTVLWAPLVVLH
ASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWSVLAAARRPSTVPAKERAA

Sequences:

>Translated_378_residues
MTNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMVLGFVGTLVCLERSVALGRPL
GYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYVPLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPW
LAGFLVLTIAGERLELARLAMGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL
TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPAVLRRPLPYRTVLWAPLVVLH
ASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWSVLAAARRPSTVPAKERAA
>Mature_377_residues
TNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMVLGFVGTLVCLERSVALGRPLG
YLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYVPLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPWL
AGFLVLTIAGERLELARLAMGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGLT
RFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPAVLRRPLPYRTVLWAPLVVLHA
SLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWSVLAAARRPSTVPAKERAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39319; Mature: 39188

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMV
CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LGFVGTLVCLERSVALGRPLGYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHCCCCHHHCHHHHHHHHHHHHHHHH
PLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPWLAGFLVLTIAGERLELARLA
HHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPA
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLRRPLPYRTVLWAPLVVLHASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLAAARRPSTVPAKERAA
HHHHHCCCCCCCCHHCCC
>Mature Secondary Structure 
TNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMV
CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LGFVGTLVCLERSVALGRPLGYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHCCCCHHHCHHHHHHHHHHHHHHHH
PLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPWLAGFLVLTIAGERLELARLA
HHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPA
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLRRPLPYRTVLWAPLVVLHASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLAAARRPSTVPAKERAA
HHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA