| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716334
Identifier: 119716334
GI number: 119716334
Start: 2247653
End: 2248132
Strand: Reverse
Name: 119716334
Synonym: Noca_2103
Alternate gene names: NA
Gene position: 2248132-2247653 (Counterclockwise)
Preceding gene: 119716335
Following gene: 119716333
Centisome position: 45.09
GC content: 76.25
Gene sequence:
>480_bases ATGTCGGTGCTCGACGCCGTCCTGACCGGGGTGCTCGTCCTCGCGACGAGCATCTGGGTCGGGGGACTGGTCGCGATCAT GGTCGTGGCCCGGATCGCGACCCGTGCCCTCGACCCGGTCGCCCGGGTCGCGCTGTTCCGCGGCCTCGGCCGCGTCTACC TCGTCGTCGGCACCGCGGCCCTGGCGGTCGGGTACGTCGCCGGCGGGCTGCTCCTGCGCGATGAGTCGTGGGGTCCGCTC CTGGTCGCCACGGTCGTGGTCGCAGTGGCGCTGGCCGCCGTCTTGGGGGTCGGCGTCGAGCAGGCCCGGCAGATGACCCG GCTGCGCCGCCGTGCCCTCGAGGCCCCAGCGGACCCCGCGCCGGCGCACTCCCTGGCCGACCAGGTGCGCCGGGGAGCGG TCCGGGCGGCCGTGCTGCGGGCCGGGATCGGCGTCTTGAGCCTGGCGCTGCTGGTGCTCGGCGTCGCGATCGCGGCGTGA
Upstream 100 bases:
>100_bases CTTCCAGGCCGCCGTCGACGACGCGGCAGCGCTGTGCCCGATCTCCCGGCTCTTCGCCGGCGCGAGCATCAGCGTGAGCG CGGAGCTGGAGAACGCCTAG
Downstream 100 bases:
>100_bases ACTCGCTCCGCGGTCGCGCCTTAGATACGATTCTGTCGTGACAAACGCCGCCCCGCCGCGACCGAGCTCGACACGCGCCG GCACCCCACGCGGGCTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSVLDAVLTGVLVLATSIWVGGLVAIMVVARIATRALDPVARVALFRGLGRVYLVVGTAALAVGYVAGGLLLRDESWGPL LVATVVVAVALAAVLGVGVEQARQMTRLRRRALEAPADPAPAHSLADQVRRGAVRAAVLRAGIGVLSLALLVLGVAIAA
Sequences:
>Translated_159_residues MSVLDAVLTGVLVLATSIWVGGLVAIMVVARIATRALDPVARVALFRGLGRVYLVVGTAALAVGYVAGGLLLRDESWGPL LVATVVVAVALAAVLGVGVEQARQMTRLRRRALEAPADPAPAHSLADQVRRGAVRAAVLRAGIGVLSLALLVLGVAIAA >Mature_158_residues SVLDAVLTGVLVLATSIWVGGLVAIMVVARIATRALDPVARVALFRGLGRVYLVVGTAALAVGYVAGGLLLRDESWGPLL VATVVVAVALAAVLGVGVEQARQMTRLRRRALEAPADPAPAHSLADQVRRGAVRAAVLRAGIGVLSLALLVLGVAIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16183; Mature: 16051
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLDAVLTGVLVLATSIWVGGLVAIMVVARIATRALDPVARVALFRGLGRVYLVVGTAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVGYVAGGLLLRDESWGPLLVATVVVAVALAAVLGVGVEQARQMTRLRRRALEAPADPA HHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC PAHSLADQVRRGAVRAAVLRAGIGVLSLALLVLGVAIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVLDAVLTGVLVLATSIWVGGLVAIMVVARIATRALDPVARVALFRGLGRVYLVVGTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVGYVAGGLLLRDESWGPLLVATVVVAVALAAVLGVGVEQARQMTRLRRRALEAPADPA HHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC PAHSLADQVRRGAVRAAVLRAGIGVLSLALLVLGVAIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA