| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716320
Identifier: 119716320
GI number: 119716320
Start: 2233356
End: 2233634
Strand: Reverse
Name: 119716320
Synonym: Noca_2089
Alternate gene names: NA
Gene position: 2233634-2233356 (Counterclockwise)
Preceding gene: 119716321
Following gene: 119716319
Centisome position: 44.8
GC content: 69.53
Gene sequence:
>279_bases ATGAGCGGAACCCTGAGGCAACTGCTGAGCTGCCACTGGTCGGCGCGACGGATCCAGCGCTACCTCGACGCGGACCCGTC GGCTCCTCTCACCCCAGGCGAGGTGGCTCGGCTCGAGGCGCATCTGTCCACGTGCGAGAAGTGCAGCGGCGTCGTCGTCG AGCACCGCACGCTGCACCAGGCCCTGTCGCTGTGGTCGAGCCGCGCCTACGTCGACCCGTCGGCGGTGGACCGGGTCCGG CACTTCCTCGACGACATCACCGAGGGACGGACCGGATGA
Upstream 100 bases:
>100_bases TCGATGTCCCCGTCGGGACGGTGATGTCCCGACTGAGCCGCGCCCGCGATCGGCTGCGGCGGAGTCTCGGCCCCACCACC CTGTCCCGAGGAGGGCTGTC
Downstream 100 bases:
>100_bases GCGCCGGACACCCCAGGGGAGACGGCCCCTGGGACCTGGTGATCATCGGGGGCGGCACCGCCGGCATCGTGGGTGCCAAG ACCGCGGCCCGCTTCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSGTLRQLLSCHWSARRIQRYLDADPSAPLTPGEVARLEAHLSTCEKCSGVVVEHRTLHQALSLWSSRAYVDPSAVDRVR HFLDDITEGRTG
Sequences:
>Translated_92_residues MSGTLRQLLSCHWSARRIQRYLDADPSAPLTPGEVARLEAHLSTCEKCSGVVVEHRTLHQALSLWSSRAYVDPSAVDRVR HFLDDITEGRTG >Mature_91_residues SGTLRQLLSCHWSARRIQRYLDADPSAPLTPGEVARLEAHLSTCEKCSGVVVEHRTLHQALSLWSSRAYVDPSAVDRVRH FLDDITEGRTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10286; Mature: 10155
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTLRQLLSCHWSARRIQRYLDADPSAPLTPGEVARLEAHLSTCEKCSGVVVEHRTLHQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH ALSLWSSRAYVDPSAVDRVRHFLDDITEGRTG HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGTLRQLLSCHWSARRIQRYLDADPSAPLTPGEVARLEAHLSTCEKCSGVVVEHRTLHQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH ALSLWSSRAYVDPSAVDRVRHFLDDITEGRTG HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA