| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716292
Identifier: 119716292
GI number: 119716292
Start: 2204632
End: 2205942
Strand: Direct
Name: 119716292
Synonym: Noca_2061
Alternate gene names: NA
Gene position: 2204632-2205942 (Clockwise)
Preceding gene: 119716291
Following gene: 119716293
Centisome position: 44.22
GC content: 76.05
Gene sequence:
>1311_bases GTGGACCGGCCCCCGCTGCTGCTGTGGCTGTTCTCCCTCGCCGGCCACGTCACCCCGGGCGGCGGGGTCGTCGTCGCGCC CGCGGTCAAGCTGATGGGCGCGACCGCCAGTGCGGTGTCGGTGCTGCTGGCCGGCGTCCTGGGCGGCCTGCTCGGCAACG GGCGGCTCTGGCCGCGGGTGGCCGCGCCCGCCGTGGCCCTGGCGCTGCTGTCCAGCCCGTTCTTCGGCATGCCCGAGACC GACGGCGAGGTGCTCGCCGTCCCGTTCGTGCTGCTGGGCGTGGTGCTGCTCCTGGCCGCCGTACGGGAGCCGCAGGGCGC GCACCGACGGCGCGGCCTCGCGCTGGCGGCGGGCGCCGGCGCCGCGGCCATGGCGGCGGCGCTGGTCAAGCAGAACGCCG TCGACGTCTTCGTGCTCGCGGCGGTCCTGCTGCTGACCCGGCACGGCCGGGCCCGGGCGCTGGCCGCGCGGGCGGCGGCG TTCGCCGGCGGCACCCTGGCCGTGCTGGCGGTGGCTCTCGCGGGCGCCGCCGTGCGCGGGACGACGCCGCGCGGGATCTG GGACGCGGTCTTCGTCTTCCGGCTGGAGGCGTCCGCGGTGATCGGGACGTCGTCCTCGCCGGCGACGCCCGAGCGGCTCC TGCACCTGGCCACGGTGTTCCTCGTCAGCGGCGGCGCGCCCCTGCTGGTGCTGCTCGTGCTCCTGGTCCTCACCGGCCGG GTCGGCCGGTCCTCGGGCCTGACCTGGCCGGCGCTGGCCCTGGTCGGCTGGGAGCTGGTGGGCGTCGCCCTGGGCGGCAG CTACTGGTGGCACTACCTCACCGGCCTGGTGCCCGGGCTGGTGCTGCTGGTCGTCCTCGCCGCGCCCGTGCGTGGTCGAT CCCTGGTGACCGCCGTGCTGGCCTACGTCCTGATCGTCAACCCGTTGGCCTGGCTGCGCTGGAGCCAGCTGCCGAACGAC GTGTCGTCGGACGAGCAGGTGGCGGCGTACCTGCGCATGCACGCGGAGCCCTCCGACGGCGTGGTCGTCGCGTTCGGCCA CCCCGACATCGTGGCGGCCAGCGGCCTGAGCAGCCCCTACCCCTACCTGTGGAGCCTGCCCGTGCGGGTCCGCGACCCGC GGCTGCGCGGCCTCGAGGACATGCTGGCCGGGCCGGACGCGCCGCGCTGGGTCGTCGTCGACGGTGACAGCCTCGCGTCG TGGGGGCTGGACGCGCGGGCCGCGGAGGGGTACTTGGTACACCACTACGGTGAACAGCGGACGTACGGCGACTGGCACGT CTGGGAGCGAGAGGAAGGAGTGGGCCCGTGA
Upstream 100 bases:
>100_bases GCTGCCGTTCCTGCACGTCCCGCTGACCGCCGACGAGAGCGGGTTCCTCCTTCTCGGCCAGCACTGGCACCCGGGCTCCT CCCTGTACGGCGACTACTGG
Downstream 100 bases:
>100_bases GGATCCTGGTGGCCGAGGACGACGTCCGCCTCGCCGACGTCCTCGAGGAGTCCCTGGCCGAGGCCGGGTGGCAGGTCGAG GTGGCGCACGACGGCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MDRPPLLLWLFSLAGHVTPGGGVVVAPAVKLMGATASAVSVLLAGVLGGLLGNGRLWPRVAAPAVALALLSSPFFGMPET DGEVLAVPFVLLGVVLLLAAVREPQGAHRRRGLALAAGAGAAAMAAALVKQNAVDVFVLAAVLLLTRHGRARALAARAAA FAGGTLAVLAVALAGAAVRGTTPRGIWDAVFVFRLEASAVIGTSSSPATPERLLHLATVFLVSGGAPLLVLLVLLVLTGR VGRSSGLTWPALALVGWELVGVALGGSYWWHYLTGLVPGLVLLVVLAAPVRGRSLVTAVLAYVLIVNPLAWLRWSQLPND VSSDEQVAAYLRMHAEPSDGVVVAFGHPDIVAASGLSSPYPYLWSLPVRVRDPRLRGLEDMLAGPDAPRWVVVDGDSLAS WGLDARAAEGYLVHHYGEQRTYGDWHVWEREEGVGP
Sequences:
>Translated_436_residues MDRPPLLLWLFSLAGHVTPGGGVVVAPAVKLMGATASAVSVLLAGVLGGLLGNGRLWPRVAAPAVALALLSSPFFGMPET DGEVLAVPFVLLGVVLLLAAVREPQGAHRRRGLALAAGAGAAAMAAALVKQNAVDVFVLAAVLLLTRHGRARALAARAAA FAGGTLAVLAVALAGAAVRGTTPRGIWDAVFVFRLEASAVIGTSSSPATPERLLHLATVFLVSGGAPLLVLLVLLVLTGR VGRSSGLTWPALALVGWELVGVALGGSYWWHYLTGLVPGLVLLVVLAAPVRGRSLVTAVLAYVLIVNPLAWLRWSQLPND VSSDEQVAAYLRMHAEPSDGVVVAFGHPDIVAASGLSSPYPYLWSLPVRVRDPRLRGLEDMLAGPDAPRWVVVDGDSLAS WGLDARAAEGYLVHHYGEQRTYGDWHVWEREEGVGP >Mature_436_residues MDRPPLLLWLFSLAGHVTPGGGVVVAPAVKLMGATASAVSVLLAGVLGGLLGNGRLWPRVAAPAVALALLSSPFFGMPET DGEVLAVPFVLLGVVLLLAAVREPQGAHRRRGLALAAGAGAAAMAAALVKQNAVDVFVLAAVLLLTRHGRARALAARAAA FAGGTLAVLAVALAGAAVRGTTPRGIWDAVFVFRLEASAVIGTSSSPATPERLLHLATVFLVSGGAPLLVLLVLLVLTGR VGRSSGLTWPALALVGWELVGVALGGSYWWHYLTGLVPGLVLLVVLAAPVRGRSLVTAVLAYVLIVNPLAWLRWSQLPND VSSDEQVAAYLRMHAEPSDGVVVAFGHPDIVAASGLSSPYPYLWSLPVRVRDPRLRGLEDMLAGPDAPRWVVVDGDSLAS WGLDARAAEGYLVHHYGEQRTYGDWHVWEREEGVGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45446; Mature: 45446
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPPLLLWLFSLAGHVTPGGGVVVAPAVKLMGATASAVSVLLAGVLGGLLGNGRLWPRV CCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH AAPAVALALLSSPFFGMPETDGEVLAVPFVLLGVVLLLAAVREPQGAHRRRGLALAAGAG HHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCC AAAMAAALVKQNAVDVFVLAAVLLLTRHGRARALAARAAAFAGGTLAVLAVALAGAAVRG HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCC TTPRGIWDAVFVFRLEASAVIGTSSSPATPERLLHLATVFLVSGGAPLLVLLVLLVLTGR CCCCHHHHHHHHHEEECCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC VGRSSGLTWPALALVGWELVGVALGGSYWWHYLTGLVPGLVLLVVLAAPVRGRSLVTAVL CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AYVLIVNPLAWLRWSQLPNDVSSDEQVAAYLRMHAEPSDGVVVAFGHPDIVAASGLSSPY HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCC PYLWSLPVRVRDPRLRGLEDMLAGPDAPRWVVVDGDSLASWGLDARAAEGYLVHHYGEQR CEEEECCEEECCCHHCCHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCCEEEEECCCCC TYGDWHVWEREEGVGP CCCCCEEEECCCCCCC >Mature Secondary Structure MDRPPLLLWLFSLAGHVTPGGGVVVAPAVKLMGATASAVSVLLAGVLGGLLGNGRLWPRV CCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH AAPAVALALLSSPFFGMPETDGEVLAVPFVLLGVVLLLAAVREPQGAHRRRGLALAAGAG HHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCC AAAMAAALVKQNAVDVFVLAAVLLLTRHGRARALAARAAAFAGGTLAVLAVALAGAAVRG HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCC TTPRGIWDAVFVFRLEASAVIGTSSSPATPERLLHLATVFLVSGGAPLLVLLVLLVLTGR CCCCHHHHHHHHHEEECCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC VGRSSGLTWPALALVGWELVGVALGGSYWWHYLTGLVPGLVLLVVLAAPVRGRSLVTAVL CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AYVLIVNPLAWLRWSQLPNDVSSDEQVAAYLRMHAEPSDGVVVAFGHPDIVAASGLSSPY HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCC PYLWSLPVRVRDPRLRGLEDMLAGPDAPRWVVVDGDSLASWGLDARAAEGYLVHHYGEQR CEEEECCEEECCCHHCCHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCCEEEEECCCCC TYGDWHVWEREEGVGP CCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA