Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716268

Identifier: 119716268

GI number: 119716268

Start: 2180462

End: 2180926

Strand: Direct

Name: 119716268

Synonym: Noca_2037

Alternate gene names: NA

Gene position: 2180462-2180926 (Clockwise)

Preceding gene: 119716264

Following gene: 119716274

Centisome position: 43.73

GC content: 74.84

Gene sequence:

>465_bases
GTGAACGACAGCGACCGTGAGACCGATCCCGAGACCCAGGAGCTGCAGGCGCCGCCCGTCGTCTTCCCGGGCCAGGCCGG
CCCGGAGTCGGCGTACCGCACCGCCTTCGACCTGCTCGCCCGGCGGGCGCCGCGGGAGGCGCTCGAGGTCATCGAGCCGG
CGCTGGCCGAGGAGCCCGACAACACCGGGCTGCGCACGCTGCGCGCCTGGGCCTTCCTGATGCGCGCCCAGCTGCAGCGT
GCCGAGGACGAGCTGAACCGCCTGGTCGAGGAGAACCCCGCCGACGACTGGACGCGGCACGCCCTCGGGCGGTGCCTGGA
GCGGCAGAGCCGGTACGCCGAGGCGCTCCCGCACCTGCGCCTGGCCGCGACCATGAGCGGCGACCCCGAGCACGACCTCG
CCGTGCTGCGGGTGGAGCGGCGGCTCGCCGAGACCGGCGAGACGTCGTACGACAAGCTGGTCTGA

Upstream 100 bases:

>100_bases
AATCTGGCCGCACGCGCACGGCCGCGGTAGAGGAATAGGGCCCCGCCCGCCGCCGGCCCGGAAGCGGGAATCCGCCGGGT
CCGGGGTACGTTGGATCGTC

Downstream 100 bases:

>100_bases
CCGCCGCAGCCGGCCGACGGCTCGACTGTTCGGCCAATACTGGAACTTCTGGCCCGAAGTTTCGGCCCAACAGTTCCGGT
TTCCCCGGTTCACCGGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MNDSDRETDPETQELQAPPVVFPGQAGPESAYRTAFDLLARRAPREALEVIEPALAEEPDNTGLRTLRAWAFLMRAQLQR
AEDELNRLVEENPADDWTRHALGRCLERQSRYAEALPHLRLAATMSGDPEHDLAVLRVERRLAETGETSYDKLV

Sequences:

>Translated_154_residues
MNDSDRETDPETQELQAPPVVFPGQAGPESAYRTAFDLLARRAPREALEVIEPALAEEPDNTGLRTLRAWAFLMRAQLQR
AEDELNRLVEENPADDWTRHALGRCLERQSRYAEALPHLRLAATMSGDPEHDLAVLRVERRLAETGETSYDKLV
>Mature_154_residues
MNDSDRETDPETQELQAPPVVFPGQAGPESAYRTAFDLLARRAPREALEVIEPALAEEPDNTGLRTLRAWAFLMRAQLQR
AEDELNRLVEENPADDWTRHALGRCLERQSRYAEALPHLRLAATMSGDPEHDLAVLRVERRLAETGETSYDKLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17433; Mature: 17433

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSDRETDPETQELQAPPVVFPGQAGPESAYRTAFDLLARRAPREALEVIEPALAEEPD
CCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
NTGLRTLRAWAFLMRAQLQRAEDELNRLVEENPADDWTRHALGRCLERQSRYAEALPHLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LAATMSGDPEHDLAVLRVERRLAETGETSYDKLV
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCC
>Mature Secondary Structure
MNDSDRETDPETQELQAPPVVFPGQAGPESAYRTAFDLLARRAPREALEVIEPALAEEPD
CCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
NTGLRTLRAWAFLMRAQLQRAEDELNRLVEENPADDWTRHALGRCLERQSRYAEALPHLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LAATMSGDPEHDLAVLRVERRLAETGETSYDKLV
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA