| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is bioC [C]
Identifier: 119716274
GI number: 119716274
Start: 2186799
End: 2187548
Strand: Direct
Name: bioC [C]
Synonym: Noca_2043
Alternate gene names: 119716274
Gene position: 2186799-2187548 (Clockwise)
Preceding gene: 119716268
Following gene: 119716275
Centisome position: 43.86
GC content: 75.07
Gene sequence:
>750_bases ATGGCCTTCGACGTCGCGGCGGACGCATACGGGCGCTTCATGGGGCGGTACTCCGAGCCGCTCGCCGACCAGCTCGTCGA GCTCGCGGGAGTACGACGAGGGCAGCGGGCCGTGGACGTCGGCTGCGGGCCGGGTGTGCTGACCAGCCGCCTCGTCGAGC GGTTGGGCGCGGAGCAGGTCCGGGCCGTCGACCCGTCGCCGCCGTTCGTGGCCGCGGCCCGCGCGCGCTGCCCCGGGGTC GACGTCCGGCCGGGCACCGCCGAGCAGCTCCCGTTCGCCGACGACTCCGCCGACGTGGTGCTCGCCAACCTGGTTGTGCA CTTCATGTCCGACCCGGTCGGTGGGCTCCGCGAGATGGGCCGCGTCGGTGGCCTGGTCGGCGCCACCGTCTGGAACCACG CCACGACCGCCGGACCCCTGTCGACGTTCTGGCAGGCAGTGAAGGACCTGGACCCGGACGCCGCCGACGAGGCCTCGCTG CCCGGCACCGGCGAGGGTGCGCTCGGGGAGCTGGCCCGCGGCGCCGGCCTGCGCGACCTGGTCGAGACCACCATCACCGT CACCGTGCCGTTCTCCTCCTTCGCGGAGTGGTGGGAGCCCTACACGCTGGGCGTCGGACCGGCCGGCGACCACGTGCGCC GGCTCGACGACGAGGCCCGGGACGCGCTTCGCGACCACTGCGCCGAGCTGCTCCCCGACGGCGCCTTCACGGTCGACGCG ACGGCTTGGACGGTCCTCGGGCGCGCCTGA
Upstream 100 bases:
>100_bases GGTTCACGCCTGTGTCGATGGTCACCCAGGATCACTCAGGGGGTCGCGCCGCGGGTCCCGACCCCCTGTCCGCCACGAAC TCATCGGCCTACAGTCAGCC
Downstream 100 bases:
>100_bases CCCACGAATGCGGGGGCGCCGCGTGGGAAACTCCGGAGCGTGGACTTCTACTCCGCCTACGCCCATGGCTTCGCCCGGGT CGCCGCCTGCACGGTGCCGA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase S-Adenosyl-L-Methionine-MTase Protein; Methyltransferase; Methyltransferase Domain Family; SAM-Dependent Methyltransferase Protein; Inner Envelope Membrane Protein; Methltransferase Of Biotin Synthesis; UbiE/COQ5 Methyltransferase-Like Protein
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MAFDVAADAYGRFMGRYSEPLADQLVELAGVRRGQRAVDVGCGPGVLTSRLVERLGAEQVRAVDPSPPFVAAARARCPGV DVRPGTAEQLPFADDSADVVLANLVVHFMSDPVGGLREMGRVGGLVGATVWNHATTAGPLSTFWQAVKDLDPDAADEASL PGTGEGALGELARGAGLRDLVETTITVTVPFSSFAEWWEPYTLGVGPAGDHVRRLDDEARDALRDHCAELLPDGAFTVDA TAWTVLGRA
Sequences:
>Translated_249_residues MAFDVAADAYGRFMGRYSEPLADQLVELAGVRRGQRAVDVGCGPGVLTSRLVERLGAEQVRAVDPSPPFVAAARARCPGV DVRPGTAEQLPFADDSADVVLANLVVHFMSDPVGGLREMGRVGGLVGATVWNHATTAGPLSTFWQAVKDLDPDAADEASL PGTGEGALGELARGAGLRDLVETTITVTVPFSSFAEWWEPYTLGVGPAGDHVRRLDDEARDALRDHCAELLPDGAFTVDA TAWTVLGRA >Mature_248_residues AFDVAADAYGRFMGRYSEPLADQLVELAGVRRGQRAVDVGCGPGVLTSRLVERLGAEQVRAVDPSPPFVAAARARCPGVD VRPGTAEQLPFADDSADVVLANLVVHFMSDPVGGLREMGRVGGLVGATVWNHATTAGPLSTFWQAVKDLDPDAADEASLP GTGEGALGELARGAGLRDLVETTITVTVPFSSFAEWWEPYTLGVGPAGDHVRRLDDEARDALRDHCAELLPDGAFTVDAT AWTVLGRA
Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26222; Mature: 26090
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDVAADAYGRFMGRYSEPLADQLVELAGVRRGQRAVDVGCGPGVLTSRLVERLGAEQV CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCHHHH RAVDPSPPFVAAARARCPGVDVRPGTAEQLPFADDSADVVLANLVVHFMSDPVGGLREMG HCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH RVGGLVGATVWNHATTAGPLSTFWQAVKDLDPDAADEASLPGTGEGALGELARGAGLRDL HHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH VETTITVTVPFSSFAEWWEPYTLGVGPAGDHVRRLDDEARDALRDHCAELLPDGAFTVDA HHHHEEEEECHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH TAWTVLGRA HHHHHCCCC >Mature Secondary Structure AFDVAADAYGRFMGRYSEPLADQLVELAGVRRGQRAVDVGCGPGVLTSRLVERLGAEQV CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCHHHH RAVDPSPPFVAAARARCPGVDVRPGTAEQLPFADDSADVVLANLVVHFMSDPVGGLREMG HCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH RVGGLVGATVWNHATTAGPLSTFWQAVKDLDPDAADEASLPGTGEGALGELARGAGLRDL HHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH VETTITVTVPFSSFAEWWEPYTLGVGPAGDHVRRLDDEARDALRDHCAELLPDGAFTVDA HHHHEEEEECHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH TAWTVLGRA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA