| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is maeB [C]
Identifier: 119716265
GI number: 119716265
Start: 2177285
End: 2178670
Strand: Reverse
Name: maeB [C]
Synonym: Noca_2034
Alternate gene names: 119716265
Gene position: 2178670-2177285 (Counterclockwise)
Preceding gene: 119716266
Following gene: 119716263
Centisome position: 43.7
GC content: 70.2
Gene sequence:
>1386_bases ATGGCAACTCCCAGTCCCGGCTACTCGATCACGGTCCGGATGGAGGTCCCTTCGTCCGCACGGGCCACCGGAGACGTGGT CGCCGCAGTGACCGGGGCCGGGGGCTCGGTCACCGCTCTCGATGTGGCCGAGTCCCTCGCGGACCGGCTCGTCGTCGACG TCAGCTGCGACGCCTCCGACCTGGAGCACGCCGACCTGATCACGGAGGCGCTCAACCGCGTGGACGGTGCGACGGTCCGC AAGGTCAGCGATCGCACCTTCCTGCTGCACCTCGGGGGCAAGCTCGAGGTCGTGCCGAAGGTGCCGCTCAAGCACCGTGA CGACCTCTCACGCGCCTACACCCCGGGAGTGGCGAGGGTGTGCCTGGCCATCGCGAAGAACCCGGAGGACGCTCGCCGAC TCACCATCAAGCGCAACACGGTGGCCGTGGTGACCGACGGCTCGGCGGTCCTGGGACTGGGCAACCTGGGCCCTGCGGCG GCCCTGCCGGTGATGGAGGGCAAGGCGGCACTCTTCAAGCAGTTCGCCGGGGTCGACGCGTGGCCGGTCTGCCTCGACAC CCAGGACACCGAGGAGATCATCGCGATCGTGAAGGCGATCGCGCCGGTGTACGGCGGCATCAACCTCGAGGACATCGCCG CGCCACGGTGCTTCGAGATCGAGGCCCGGCTGCGCGCGGAGCTCGACATCCCCGTGTTCCACGACGACCAGCACGGTACG GCGATCGTGGTGCTCGCCGCTCTCACCAACGCCCTGCGGGTCGTGGGCAAGCAGCTGAGCGAGGTGCGCATCGTCGTCAG CGGGGTGGGAGCGGCCGGTCACGCGATCATCGAGCTGCTGCACGCCCAGGGCGCGACCGACATCGTGGCCTGTGGCCGGA GCGGCTCGGTGCACGGCGGACAGGAGAACCTCGACTCGGCGCGACAGTGGATCGCCGACCACACCAACCGCGACCGCTTC GCCGGCTCGCTCAGGCAGGCGATGGTCGGGGCGGACGTCTTCATCGGCGTATCGGCGCCGAACCTGCTCACCGGCGACGA CGTCGCGACGATGGCCGACGATGCGATCGTCTTCGCGCTCGCGAACCCCGACCCGGAGGTCGACCCGGTCGCCGCGGGAC AGCACGCAGCGGTGGTCGCGACCGGTCGCTCCGACTACCCCAACCAGATCAACAACGTGTTGGCCTTCCCGGGGTTCTTC CGCGGGATGCTCGATGCCGGCACCCACGACATCACCCAGGAGGTCATGCTCGCGGCCGCCTCCGCGATCGCGGACGCCGT CTCGCCGTCGGAGCTGAACGCCAGCTACATCGTGCCCTCGGTCTTCGACCCCCGTGTCGCAACCGCGGTGGCCGATGCCG TGCGCGAGGCCGCCACGCCGGCCTGA
Upstream 100 bases:
>100_bases CGCAGCGGGCGGCGCTACGCTCGGCCGGCACCCGTATGAGCCCAGACCGGCACGTCGGTCCTGAGGCCCTACCTCCAGCT ACCCGACAAAAGGGGCGTCC
Downstream 100 bases:
>100_bases GACTGCCCGCCAGGCACTGTGAGCCCGTTGTCTATACCTTGCTCGCCACCACCATGTAGTTCTCGGCCTCAGGGTTGAAC GTGCTCATTTCCGTCCGGAG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MATPSPGYSITVRMEVPSSARATGDVVAAVTGAGGSVTALDVAESLADRLVVDVSCDASDLEHADLITEALNRVDGATVR KVSDRTFLLHLGGKLEVVPKVPLKHRDDLSRAYTPGVARVCLAIAKNPEDARRLTIKRNTVAVVTDGSAVLGLGNLGPAA ALPVMEGKAALFKQFAGVDAWPVCLDTQDTEEIIAIVKAIAPVYGGINLEDIAAPRCFEIEARLRAELDIPVFHDDQHGT AIVVLAALTNALRVVGKQLSEVRIVVSGVGAAGHAIIELLHAQGATDIVACGRSGSVHGGQENLDSARQWIADHTNRDRF AGSLRQAMVGADVFIGVSAPNLLTGDDVATMADDAIVFALANPDPEVDPVAAGQHAAVVATGRSDYPNQINNVLAFPGFF RGMLDAGTHDITQEVMLAAASAIADAVSPSELNASYIVPSVFDPRVATAVADAVREAATPA
Sequences:
>Translated_461_residues MATPSPGYSITVRMEVPSSARATGDVVAAVTGAGGSVTALDVAESLADRLVVDVSCDASDLEHADLITEALNRVDGATVR KVSDRTFLLHLGGKLEVVPKVPLKHRDDLSRAYTPGVARVCLAIAKNPEDARRLTIKRNTVAVVTDGSAVLGLGNLGPAA ALPVMEGKAALFKQFAGVDAWPVCLDTQDTEEIIAIVKAIAPVYGGINLEDIAAPRCFEIEARLRAELDIPVFHDDQHGT AIVVLAALTNALRVVGKQLSEVRIVVSGVGAAGHAIIELLHAQGATDIVACGRSGSVHGGQENLDSARQWIADHTNRDRF AGSLRQAMVGADVFIGVSAPNLLTGDDVATMADDAIVFALANPDPEVDPVAAGQHAAVVATGRSDYPNQINNVLAFPGFF RGMLDAGTHDITQEVMLAAASAIADAVSPSELNASYIVPSVFDPRVATAVADAVREAATPA >Mature_460_residues ATPSPGYSITVRMEVPSSARATGDVVAAVTGAGGSVTALDVAESLADRLVVDVSCDASDLEHADLITEALNRVDGATVRK VSDRTFLLHLGGKLEVVPKVPLKHRDDLSRAYTPGVARVCLAIAKNPEDARRLTIKRNTVAVVTDGSAVLGLGNLGPAAA LPVMEGKAALFKQFAGVDAWPVCLDTQDTEEIIAIVKAIAPVYGGINLEDIAAPRCFEIEARLRAELDIPVFHDDQHGTA IVVLAALTNALRVVGKQLSEVRIVVSGVGAAGHAIIELLHAQGATDIVACGRSGSVHGGQENLDSARQWIADHTNRDRFA GSLRQAMVGADVFIGVSAPNLLTGDDVATMADDAIVFALANPDPEVDPVAAGQHAAVVATGRSDYPNQINNVLAFPGFFR GMLDAGTHDITQEVMLAAASAIADAVSPSELNASYIVPSVFDPRVATAVADAVREAATPA
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=375, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI62420882, Length=361, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI62420880, Length=361, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI239049447, Length=361, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI1788806, Length=385, Percent_Identity=47.5324675324675, Blast_Score=328, Evalue=4e-91, Organism=Caenorhabditis elegans, GI17537199, Length=417, Percent_Identity=27.0983213429257, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24646388, Length=368, Percent_Identity=26.9021739130435, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646386, Length=368, Percent_Identity=26.9021739130435, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI78707242, Length=367, Percent_Identity=24.7956403269755, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI78707238, Length=367, Percent_Identity=24.7956403269755, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI78707240, Length=367, Percent_Identity=25.0681198910082, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 47881; Mature: 47750
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPSPGYSITVRMEVPSSARATGDVVAAVTGAGGSVTALDVAESLADRLVVDVSCDASD CCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHEEEEECCCCCC LEHADLITEALNRVDGATVRKVSDRTFLLHLGGKLEVVPKVPLKHRDDLSRAYTPGVARV CHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCEEEEECCCCCCCCHHHHHHCCCHHHHH CLAIAKNPEDARRLTIKRNTVAVVTDGSAVLGLGNLGPAAALPVMEGKAALFKQFAGVDA HHHHHCCCCHHHEEEEECCEEEEEECCCEEEEECCCCCHHCCCCCCCHHHHHHHHHCCCC WPVCLDTQDTEEIIAIVKAIAPVYGGINLEDIAAPRCFEIEARLRAELDIPVFHDDQHGT CEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEHHHEEECCCEEECCCCCC AIVVLAALTNALRVVGKQLSEVRIVVSGVGAAGHAIIELLHAQGATDIVACGRSGSVHGG EEHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC QENLDSARQWIADHTNRDRFAGSLRQAMVGADVFIGVSAPNLLTGDDVATMADDAIVFAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHCCCCEEEEEE ANPDPEVDPVAAGQHAAVVATGRSDYPNQINNVLAFPGFFRGMLDAGTHDITQEVMLAAA CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHEECCHHHHHHHHCCCHHHHHHHHHHHH SAIADAVSPSELNASYIVPSVFDPRVATAVADAVREAATPA HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATPSPGYSITVRMEVPSSARATGDVVAAVTGAGGSVTALDVAESLADRLVVDVSCDASD CCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHEEEEECCCCCC LEHADLITEALNRVDGATVRKVSDRTFLLHLGGKLEVVPKVPLKHRDDLSRAYTPGVARV CHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCEEEEECCCCCCCCHHHHHHCCCHHHHH CLAIAKNPEDARRLTIKRNTVAVVTDGSAVLGLGNLGPAAALPVMEGKAALFKQFAGVDA HHHHHCCCCHHHEEEEECCEEEEEECCCEEEEECCCCCHHCCCCCCCHHHHHHHHHCCCC WPVCLDTQDTEEIIAIVKAIAPVYGGINLEDIAAPRCFEIEARLRAELDIPVFHDDQHGT CEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEHHHEEECCCEEECCCCCC AIVVLAALTNALRVVGKQLSEVRIVVSGVGAAGHAIIELLHAQGATDIVACGRSGSVHGG EEHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC QENLDSARQWIADHTNRDRFAGSLRQAMVGADVFIGVSAPNLLTGDDVATMADDAIVFAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHCCCCEEEEEE ANPDPEVDPVAAGQHAAVVATGRSDYPNQINNVLAFPGFFRGMLDAGTHDITQEVMLAAA CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHEECCHHHHHHHHCCCHHHHHHHHHHHH SAIADAVSPSELNASYIVPSVFDPRVATAVADAVREAATPA HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]