| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is aceE [H]
Identifier: 119716225
GI number: 119716225
Start: 2130565
End: 2133363
Strand: Reverse
Name: aceE [H]
Synonym: Noca_1993
Alternate gene names: 119716225
Gene position: 2133363-2130565 (Counterclockwise)
Preceding gene: 119716234
Following gene: 119716223
Centisome position: 42.79
GC content: 69.6
Gene sequence:
>2799_bases GTGACCGAAGACCCAACCCCTGCTTCTGGCCCCACCCCTGGCACGGACACCAAGCGGAGCGGCGCGATCCCGACCGTCAT CCACGAAGGACTGCCGACCCAGCTGCCCGACACCGACCCGGACGAGACCACCGACTGGATCGACTCCTTCGACTCACTCG TCGGGGAACGCGGCCGCGAACGTGCCCGCTACGTCATGCTGCGCCTCCTCGAACGTGCGCGGGAGATGCAGGTGGGCGTG CCCGCCCTGCGGAGCACCGACTACATCAACACCATCCCGCCCGAGCGTGAGCCGTGGTTCCCCGGGGACGAGGAGACCGA GCGTCGGATCCGCGCGTTCATCCGCTGGAACGCCGCGGTCATGGTGTCGAGCGCCAACCGCAAGGGCCTCGAGGTCGGTG GTCACATCGCCACCTACCAGTCCTCCGCGAGCCTCTACGAGGTCGGCTTCAACCACTTCTTCCGCGGCAAGGACCACCCC GGTGGCGGCGACCAGGTCTTCATCCAGGGCCACGCCTCCCCCGGCATCTACGCTCGCGCGTTCCTCGAGGGCCGGCTGAC CGAGACCCAGCTCTCCCGGTTCCGCCAGGAGGTCCAGCACGGCCCGCACGCCGGCCTCTCGTCGTACCCCCACCCGCGCC TGATGCCGGAGTTCTGGGAGTTCCCGACGGTGTCGATGGGGCTGACCTCGCTCAACTCGATCTACCAGGCACGGTTCAAC CGCTACCTGCACAACCGCGGCATCAAGGACACCGCCCAGCAGCGCGTGTGGGCGTTCCTCGGCGACGGCGAGATGGGCGA GCCGGAGTCGCTCGGCGCGATCCGGGTCGCCGCCCGCGAGGAGCTGGACAACCTGGTCTGGGTCGTGAACTGCAACCTGC AGCAGCTCGACGGACCGGTGACCGGCAACGGCAAGATCATCCAGGAGCTCGAGGCCAACTTCCGGGGCGCCGGCTGGAAC GTGATCAAGGTCGTGTGGGGCCGCGAGTGGGACCAGCTGCTGGCCCGCGACGTCGACGGCGTCCTGGTCAACCGGATGAA CTCCACGCCGGACGGCGCGTTCCAGACCTACTCGGTCGAGTCCGGCGAGTACGTCCGCGAGAGCTTCTTCGGGGCCGACC CGCGGCTGCGCAAGATGGTCGAGCACATGAGCGACGACCAGATCCGCAAGCTGCCGCGCGGTGGCCACGACTACCGCAAG GTGTACGCCGCCTTCGACGCGGCCACCAAGCACGTCGGCCAGCCGACCGTGATCCTGGCCAAGACCGTCAAGGGCTGGAC GATCGACGCGCTGGAGGGCCGCAACGCGACCCACCAGATGAAGAAGCTGACCCAGGACGACCTGAAGAAGTTCCGGGACC GGCTCTACCTCCCGATCTCCGACCGCGACCTGGAGCGCACCTACGAGGAGACCGGCGCCGCACCGTTCTTCCACCCCGGC ATGGAGTCCCCCGAGATCGAGTACATGCTCGAGCGTCGCCGCCAGCTCGGCGGGTCGATCCCCCAGCGGGTCCAGCGCGC CAAGCCGCTCCAGCTGCCGGGCGACGCGATGTACGCCGACCTCAAGCAGGGCTCGGGCAAGCACGCCATCGCCTCCACGA TGGCGCTGGTGCGGCTGCTCAAGGACTGGATGAAGGACCCCGAGATCGGCAAGCGGATCGTGCCGATCGCCCCGGACGAG TACCGCACGTTCGGCATGGACTCGATGTTCCCGAGCGCGAAGGTGTACAACCCGGGCGGCCAGCAGTACGAGTCGGTCGA CCGGAAACTGTTGCTCTCCTACAAGGAGTCCGCCCAGGGGCAGCTGCTCCACGAGGGCATCTCGGAGGCCGGTGGCGTCG CGTCCGCGACCGCCGCGGGCTCGGCGTACTCCACGCACGGCGAGCACATGATCCCGTTCTTCATCTTCTACTCGATGTTC GGGTTCCAGCGCACCGGCGACTCGATCTGGGCGATGAGCGACCAGCTCGCCCGCGGCTTCCTGATCGGCGCCACCGCCGG CCGGACCACGCTGACCGGCGAGGGCCTGCAGCACGCCGACGGCCACTCGCCGCTGCTCGCGGCGTCCAACCCGGCGGTCG TGCACTACGACCCGGCGTTCGCCTACGAGATCAGCCACGTGATGCGCTCCGGCCTGGAGCGGATGTACGGCCCGGACGCC GAGGACGTGATCTTCTACATCACCGTCTACAACGAGCCGGTGCAGCAGCCGGCCGAGCCCGAGGACGTCGACGTCGAGGG CATCCTCAAGGGCATCCACCACGTCTCCTCCGCGGACGGCGAGGGACCGCGGGCACAGCTGCTCGCCTCCGGTGTCGGGT TCCCGTGGATCAAGGAGGCCCAGCAGATCCTGGCCGACGAGTGGGGCGTGCGCGCCGACACCTGGTCGGTCACCTCGTGG AACGAGCTGGCCCGGGACGGGGCGGCCGCCGAGGAGTGGAACCTGCTGCACCCGGGCGAGACCCCGCGCACGGCGTACGT CACGGACAAGCTGGCCGGCGCGTCCGGTCCGGTCGTGGCGGTCTCGGACTACATGCGCGCGGTGCCGCTGCAGATCGCCC GCTGGGTCCCGGCCGACTACCGCGTGCTCGGCGCCGACGGCTACGGCTTCGCCGACACCCGGCCCGCCGCCCGCCGGTTC TTCCACATCGACGCCCAGTCGGTGGTCGTGCAGACCCTGCAGGCCCTCGCCGACGCCGGCCAGATCGACCGCTCGAAGGT CGAGGAGGCGTTCGCGAAGTACCGCATCGACGACCCCACCGCGGTCGCCGGCGTCAAGCAGGAAGGTGGCGACGCCTGA
Upstream 100 bases:
>100_bases CGCAACCCGTCCCGCTCGAACCGCCCCCTACGACGGACCGCACCGTGGGTCTACCGGTGGGTAAATTCGCCGCCTCCCGG GCGCGTGCGACGATGGGCCC
Downstream 100 bases:
>100_bases TCGCTCCGCGTTGGCGGTTTCCCCGGTTCACCGGGGAAGTTGGAACTTCTGGCCCGAAACTTCGGCCCAACAGTTCCGGT TTCCCCGGGTAACCGGGGAA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MTEDPTPASGPTPGTDTKRSGAIPTVIHEGLPTQLPDTDPDETTDWIDSFDSLVGERGRERARYVMLRLLERAREMQVGV PALRSTDYINTIPPEREPWFPGDEETERRIRAFIRWNAAVMVSSANRKGLEVGGHIATYQSSASLYEVGFNHFFRGKDHP GGGDQVFIQGHASPGIYARAFLEGRLTETQLSRFRQEVQHGPHAGLSSYPHPRLMPEFWEFPTVSMGLTSLNSIYQARFN RYLHNRGIKDTAQQRVWAFLGDGEMGEPESLGAIRVAAREELDNLVWVVNCNLQQLDGPVTGNGKIIQELEANFRGAGWN VIKVVWGREWDQLLARDVDGVLVNRMNSTPDGAFQTYSVESGEYVRESFFGADPRLRKMVEHMSDDQIRKLPRGGHDYRK VYAAFDAATKHVGQPTVILAKTVKGWTIDALEGRNATHQMKKLTQDDLKKFRDRLYLPISDRDLERTYEETGAAPFFHPG MESPEIEYMLERRRQLGGSIPQRVQRAKPLQLPGDAMYADLKQGSGKHAIASTMALVRLLKDWMKDPEIGKRIVPIAPDE YRTFGMDSMFPSAKVYNPGGQQYESVDRKLLLSYKESAQGQLLHEGISEAGGVASATAAGSAYSTHGEHMIPFFIFYSMF GFQRTGDSIWAMSDQLARGFLIGATAGRTTLTGEGLQHADGHSPLLAASNPAVVHYDPAFAYEISHVMRSGLERMYGPDA EDVIFYITVYNEPVQQPAEPEDVDVEGILKGIHHVSSADGEGPRAQLLASGVGFPWIKEAQQILADEWGVRADTWSVTSW NELARDGAAAEEWNLLHPGETPRTAYVTDKLAGASGPVVAVSDYMRAVPLQIARWVPADYRVLGADGYGFADTRPAARRF FHIDAQSVVVQTLQALADAGQIDRSKVEEAFAKYRIDDPTAVAGVKQEGGDA
Sequences:
>Translated_932_residues MTEDPTPASGPTPGTDTKRSGAIPTVIHEGLPTQLPDTDPDETTDWIDSFDSLVGERGRERARYVMLRLLERAREMQVGV PALRSTDYINTIPPEREPWFPGDEETERRIRAFIRWNAAVMVSSANRKGLEVGGHIATYQSSASLYEVGFNHFFRGKDHP GGGDQVFIQGHASPGIYARAFLEGRLTETQLSRFRQEVQHGPHAGLSSYPHPRLMPEFWEFPTVSMGLTSLNSIYQARFN RYLHNRGIKDTAQQRVWAFLGDGEMGEPESLGAIRVAAREELDNLVWVVNCNLQQLDGPVTGNGKIIQELEANFRGAGWN VIKVVWGREWDQLLARDVDGVLVNRMNSTPDGAFQTYSVESGEYVRESFFGADPRLRKMVEHMSDDQIRKLPRGGHDYRK VYAAFDAATKHVGQPTVILAKTVKGWTIDALEGRNATHQMKKLTQDDLKKFRDRLYLPISDRDLERTYEETGAAPFFHPG MESPEIEYMLERRRQLGGSIPQRVQRAKPLQLPGDAMYADLKQGSGKHAIASTMALVRLLKDWMKDPEIGKRIVPIAPDE YRTFGMDSMFPSAKVYNPGGQQYESVDRKLLLSYKESAQGQLLHEGISEAGGVASATAAGSAYSTHGEHMIPFFIFYSMF GFQRTGDSIWAMSDQLARGFLIGATAGRTTLTGEGLQHADGHSPLLAASNPAVVHYDPAFAYEISHVMRSGLERMYGPDA EDVIFYITVYNEPVQQPAEPEDVDVEGILKGIHHVSSADGEGPRAQLLASGVGFPWIKEAQQILADEWGVRADTWSVTSW NELARDGAAAEEWNLLHPGETPRTAYVTDKLAGASGPVVAVSDYMRAVPLQIARWVPADYRVLGADGYGFADTRPAARRF FHIDAQSVVVQTLQALADAGQIDRSKVEEAFAKYRIDDPTAVAGVKQEGGDA >Mature_931_residues TEDPTPASGPTPGTDTKRSGAIPTVIHEGLPTQLPDTDPDETTDWIDSFDSLVGERGRERARYVMLRLLERAREMQVGVP ALRSTDYINTIPPEREPWFPGDEETERRIRAFIRWNAAVMVSSANRKGLEVGGHIATYQSSASLYEVGFNHFFRGKDHPG GGDQVFIQGHASPGIYARAFLEGRLTETQLSRFRQEVQHGPHAGLSSYPHPRLMPEFWEFPTVSMGLTSLNSIYQARFNR YLHNRGIKDTAQQRVWAFLGDGEMGEPESLGAIRVAAREELDNLVWVVNCNLQQLDGPVTGNGKIIQELEANFRGAGWNV IKVVWGREWDQLLARDVDGVLVNRMNSTPDGAFQTYSVESGEYVRESFFGADPRLRKMVEHMSDDQIRKLPRGGHDYRKV YAAFDAATKHVGQPTVILAKTVKGWTIDALEGRNATHQMKKLTQDDLKKFRDRLYLPISDRDLERTYEETGAAPFFHPGM ESPEIEYMLERRRQLGGSIPQRVQRAKPLQLPGDAMYADLKQGSGKHAIASTMALVRLLKDWMKDPEIGKRIVPIAPDEY RTFGMDSMFPSAKVYNPGGQQYESVDRKLLLSYKESAQGQLLHEGISEAGGVASATAAGSAYSTHGEHMIPFFIFYSMFG FQRTGDSIWAMSDQLARGFLIGATAGRTTLTGEGLQHADGHSPLLAASNPAVVHYDPAFAYEISHVMRSGLERMYGPDAE DVIFYITVYNEPVQQPAEPEDVDVEGILKGIHHVSSADGEGPRAQLLASGVGFPWIKEAQQILADEWGVRADTWSVTSWN ELARDGAAAEEWNLLHPGETPRTAYVTDKLAGASGPVVAVSDYMRAVPLQIARWVPADYRVLGADGYGFADTRPAARRFF HIDAQSVVVQTLQALADAGQIDRSKVEEAFAKYRIDDPTAVAGVKQEGGDA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=885, Percent_Identity=52.090395480226, Blast_Score=905, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 103398; Mature: 103267
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDPTPASGPTPGTDTKRSGAIPTVIHEGLPTQLPDTDPDETTDWIDSFDSLVGERGRE CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RARYVMLRLLERAREMQVGVPALRSTDYINTIPPEREPWFPGDEETERRIRAFIRWNAAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEE MVSSANRKGLEVGGHIATYQSSASLYEVGFNHFFRGKDHPGGGDQVFIQGHASPGIYARA EEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHH FLEGRLTETQLSRFRQEVQHGPHAGLSSYPHPRLMPEFWEFPTVSMGLTSLNSIYQARFN HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH RYLHNRGIKDTAQQRVWAFLGDGEMGEPESLGAIRVAAREELDNLVWVVNCNLQQLDGPV HHHHHCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHCCCCC TGNGKIIQELEANFRGAGWNVIKVVWGREWDQLLARDVDGVLVNRMNSTPDGAFQTYSVE CCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHCCCCCCCCCEEEEECC SGEYVRESFFGADPRLRKMVEHMSDDQIRKLPRGGHDYRKVYAAFDAATKHVGQPTVILA CCHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE KTVKGWTIDALEGRNATHQMKKLTQDDLKKFRDRLYLPISDRDLERTYEETGAAPFFHPG ECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCC MESPEIEYMLERRRQLGGSIPQRVQRAKPLQLPGDAMYADLKQGSGKHAIASTMALVRLL CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH KDWMKDPEIGKRIVPIAPDEYRTFGMDSMFPSAKVYNPGGQQYESVDRKLLLSYKESAQG HHHCCCHHHCCEEECCCCCHHHHCCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCH QLLHEGISEAGGVASATAAGSAYSTHGEHMIPFFIFYSMFGFQRTGDSIWAMSDQLARGF HHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE LIGATAGRTTLTGEGLQHADGHSPLLAASNPAVVHYDPAFAYEISHVMRSGLERMYGPDA EEECCCCCCEECCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC EDVIFYITVYNEPVQQPAEPEDVDVEGILKGIHHVSSADGEGPRAQLLASGVGFPWIKEA CCEEEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHH QQILADEWGVRADTWSVTSWNELARDGAAAEEWNLLHPGETPRTAYVTDKLAGASGPVVA HHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEEEEHHHCCCCCCEEE VSDYMRAVPLQIARWVPADYRVLGADGYGFADTRPAARRFFHIDAQSVVVQTLQALADAG HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHEEECCHHHHHHHHHHHHHHCC QIDRSKVEEAFAKYRIDDPTAVAGVKQEGGDA CCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure TEDPTPASGPTPGTDTKRSGAIPTVIHEGLPTQLPDTDPDETTDWIDSFDSLVGERGRE CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RARYVMLRLLERAREMQVGVPALRSTDYINTIPPEREPWFPGDEETERRIRAFIRWNAAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEE MVSSANRKGLEVGGHIATYQSSASLYEVGFNHFFRGKDHPGGGDQVFIQGHASPGIYARA EEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHH FLEGRLTETQLSRFRQEVQHGPHAGLSSYPHPRLMPEFWEFPTVSMGLTSLNSIYQARFN HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH RYLHNRGIKDTAQQRVWAFLGDGEMGEPESLGAIRVAAREELDNLVWVVNCNLQQLDGPV HHHHHCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHCCCCC TGNGKIIQELEANFRGAGWNVIKVVWGREWDQLLARDVDGVLVNRMNSTPDGAFQTYSVE CCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHCCCCCCCCCEEEEECC SGEYVRESFFGADPRLRKMVEHMSDDQIRKLPRGGHDYRKVYAAFDAATKHVGQPTVILA CCHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE KTVKGWTIDALEGRNATHQMKKLTQDDLKKFRDRLYLPISDRDLERTYEETGAAPFFHPG ECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCC MESPEIEYMLERRRQLGGSIPQRVQRAKPLQLPGDAMYADLKQGSGKHAIASTMALVRLL CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH KDWMKDPEIGKRIVPIAPDEYRTFGMDSMFPSAKVYNPGGQQYESVDRKLLLSYKESAQG HHHCCCHHHCCEEECCCCCHHHHCCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCH QLLHEGISEAGGVASATAAGSAYSTHGEHMIPFFIFYSMFGFQRTGDSIWAMSDQLARGF HHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE LIGATAGRTTLTGEGLQHADGHSPLLAASNPAVVHYDPAFAYEISHVMRSGLERMYGPDA EEECCCCCCEECCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC EDVIFYITVYNEPVQQPAEPEDVDVEGILKGIHHVSSADGEGPRAQLLASGVGFPWIKEA CCEEEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHH QQILADEWGVRADTWSVTSWNELARDGAAAEEWNLLHPGETPRTAYVTDKLAGASGPVVA HHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEEEEHHHCCCCCCEEE VSDYMRAVPLQIARWVPADYRVLGADGYGFADTRPAARRFFHIDAQSVVVQTLQALADAG HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHEEECCHHHHHHHHHHHHHHCC QIDRSKVEEAFAKYRIDDPTAVAGVKQEGGDA CCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA