| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is fabH1 [H]
Identifier: 119716221
GI number: 119716221
Start: 2125883
End: 2126887
Strand: Reverse
Name: fabH1 [H]
Synonym: Noca_1989
Alternate gene names: 119716221
Gene position: 2126887-2125883 (Counterclockwise)
Preceding gene: 119716222
Following gene: 119716220
Centisome position: 42.66
GC content: 72.34
Gene sequence:
>1005_bases ATGGCCACGATCATCGAGCAGGCCGAGGGGGCCCGGCACGCCGGGATCCTCGGCGTCGGCTCCTACCGGCCGTCCCGGGT GATCCCCAACGCCGACGTCGTCGAGGCGATCGACTCCAGCGACGAGTGGATCCAGCAGCGCTCCGGCATCAAGCAGCGCC GCTGGGCGACGCCCGAGGAGACCGTGCAGGTGATGTCGGTCGCGGCCGCGCGCAAGGCGCTCGAGCGCGCCTCGGTCGAC CCCCGGCAGATCGACTGCGTGATCGTCGCGACCGTCACCCACATGATCCAGACGCCGGCCATCGCGACCGCGATCGCCTA CGAGCTCGGCACCGACCAGGCCGCCGCGTTCGACATCTCCGCCGCGTGCGCGGGCTTCTGCCACGGGGTCGCGATGGCGG CCGACATGATCCGTGGCGGCAGCGCCGGGCACGTGCTCGTGATCGGCGTCGAGCGGCTCTCCGACCTCACCGACGTCGGC GACCGCGGCACCGCCTTCATCTTCGCCGACGGCGCCGGCGCCGCGGTGGTCGGCCCCACCGACGCCCCCGGCATCGGCCC GGTCGTCTGGGGCTCGGACGGCGAGCAGTTCGAGCTGATCCGCCAGCGCGAGGACTGGCGCGACGTCGTGGCCAGCGAGC GCCCCGAGATGCCGCACCTGGTCATGCAGGGCAACGCGGTGTTCCGCTGGGCGTCGTACTCGATGGCGAAGATCGGCCAG CTCGCGCTCGACCGTGCCGGCATCGGCATCGACGACCTCGACGTGTTCGTCCCCCACCAGGCCAACATGCGGATCACCGA CGCCATGGCGCGGGCCATGAAGCTGCCCGAGCGGGTCAAGATCGCCCGCGACATCGCCGAGCAGGGCAACACCTCGGCCG CCTCCATCCCGCTCGCCCTCGACCGGATGATCGAGGAGGGCGAGGCGCGCAGCGGCGACAAGGCCCTCCTGATCGCCTTC GGTGCCGGCCTCGCGTACGCCGCGCAGGTCGTCATCGTCCCGTAG
Upstream 100 bases:
>100_bases CGGCGCACGGCGGCACCGTCGTCGAGTGGCTCGTCGAGGACGGCGACCTGGTCTCGCCGGGCCAACCACTGCTGCGTCTG CACCCCGAGGGAGGAGCCTG
Downstream 100 bases:
>100_bases TTCCCAGCAACCCAACCGAAAGGCAGTACCCCGATGGCAACGACCGAAGAGATCCGCGCCGACCTCGCTGACATCGTCAA CGAGGTCGCCGGCATCGACG
Product: 3-oxoacyl-[acyl-carrier-protein] synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III protein 1; Beta-ketoacyl-ACP synthase III 1; KAS III 1 [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MATIIEQAEGARHAGILGVGSYRPSRVIPNADVVEAIDSSDEWIQQRSGIKQRRWATPEETVQVMSVAAARKALERASVD PRQIDCVIVATVTHMIQTPAIATAIAYELGTDQAAAFDISAACAGFCHGVAMAADMIRGGSAGHVLVIGVERLSDLTDVG DRGTAFIFADGAGAAVVGPTDAPGIGPVVWGSDGEQFELIRQREDWRDVVASERPEMPHLVMQGNAVFRWASYSMAKIGQ LALDRAGIGIDDLDVFVPHQANMRITDAMARAMKLPERVKIARDIAEQGNTSAASIPLALDRMIEEGEARSGDKALLIAF GAGLAYAAQVVIVP
Sequences:
>Translated_334_residues MATIIEQAEGARHAGILGVGSYRPSRVIPNADVVEAIDSSDEWIQQRSGIKQRRWATPEETVQVMSVAAARKALERASVD PRQIDCVIVATVTHMIQTPAIATAIAYELGTDQAAAFDISAACAGFCHGVAMAADMIRGGSAGHVLVIGVERLSDLTDVG DRGTAFIFADGAGAAVVGPTDAPGIGPVVWGSDGEQFELIRQREDWRDVVASERPEMPHLVMQGNAVFRWASYSMAKIGQ LALDRAGIGIDDLDVFVPHQANMRITDAMARAMKLPERVKIARDIAEQGNTSAASIPLALDRMIEEGEARSGDKALLIAF GAGLAYAAQVVIVP >Mature_333_residues ATIIEQAEGARHAGILGVGSYRPSRVIPNADVVEAIDSSDEWIQQRSGIKQRRWATPEETVQVMSVAAARKALERASVDP RQIDCVIVATVTHMIQTPAIATAIAYELGTDQAAAFDISAACAGFCHGVAMAADMIRGGSAGHVLVIGVERLSDLTDVGD RGTAFIFADGAGAAVVGPTDAPGIGPVVWGSDGEQFELIRQREDWRDVVASERPEMPHLVMQGNAVFRWASYSMAKIGQL ALDRAGIGIDDLDVFVPHQANMRITDAMARAMKLPERVKIARDIAEQGNTSAASIPLALDRMIEEGEARSGDKALLIAFG AGLAYAAQVVIVP
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=321, Percent_Identity=38.9408099688474, Blast_Score=211, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 35439; Mature: 35308
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIIEQAEGARHAGILGVGSYRPSRVIPNADVVEAIDSSDEWIQQRSGIKQRRWATPEE CCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHCCCCHHH TVQVMSVAAARKALERASVDPRQIDCVIVATVTHMIQTPAIATAIAYELGTDQAAAFDIS HHHHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH AACAGFCHGVAMAADMIRGGSAGHVLVIGVERLSDLTDVGDRGTAFIFADGAGAAVVGPT HHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCEEEEECCCCEEEECCC DAPGIGPVVWGSDGEQFELIRQREDWRDVVASERPEMPHLVMQGNAVFRWASYSMAKIGQ CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCHHHHHH LALDRAGIGIDDLDVFVPHQANMRITDAMARAMKLPERVKIARDIAEQGNTSAASIPLAL HHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCHHHH DRMIEEGEARSGDKALLIAFGAGLAYAAQVVIVP HHHHHHCCCCCCCCEEEEEECCCHHHEEEEEEEC >Mature Secondary Structure ATIIEQAEGARHAGILGVGSYRPSRVIPNADVVEAIDSSDEWIQQRSGIKQRRWATPEE CCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHCCCCHHH TVQVMSVAAARKALERASVDPRQIDCVIVATVTHMIQTPAIATAIAYELGTDQAAAFDIS HHHHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH AACAGFCHGVAMAADMIRGGSAGHVLVIGVERLSDLTDVGDRGTAFIFADGAGAAVVGPT HHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCEEEEECCCCEEEECCC DAPGIGPVVWGSDGEQFELIRQREDWRDVVASERPEMPHLVMQGNAVFRWASYSMAKIGQ CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCHHHHHH LALDRAGIGIDDLDVFVPHQANMRITDAMARAMKLPERVKIARDIAEQGNTSAASIPLAL HHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCHHHH DRMIEEGEARSGDKALLIAFGAGLAYAAQVVIVP HHHHHHCCCCCCCCEEEEEECCCHHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]