| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716202
Identifier: 119716202
GI number: 119716202
Start: 2099818
End: 2100768
Strand: Direct
Name: 119716202
Synonym: Noca_1970
Alternate gene names: NA
Gene position: 2099818-2100768 (Clockwise)
Preceding gene: 119716201
Following gene: 119716203
Centisome position: 42.12
GC content: 62.46
Gene sequence:
>951_bases GTGTCAGTTGAGGAAACAGAGACGACTTCGACGGATGAGACAAGGAAGCCTCGCGCGTTTCATGTCGGGTTGATGCGTCG AACGAGAGACACGTTTGAGTTCAAGTCCGCTGGTGTCATCGGTCTGTCTCCCGATGGCGGAGTCTTCATCGCACCGATGC AGGCCGGACCGTGGCGATATGGACCTCTGGAAGGGGATATCTCGGCGCTGCCCACAAGCGCGGAGACTCCGTACAGGCCA AAGCTGCACTACCACCGTTCGGGACGGGCCTATGCAACGCTCTCCGGGCAGGACCTTGAGCGCAAGAGTCTCCAGCTCAC CCGGCTGCCGCGGTTGCGCTACGCGCAGATCTTCTCGCTGCACTGCATCCGGACCTGGGAGCTTCCGACGCGGGGCAAGG CCCCGAAGCTCGGGGACCAGCTTACGGCCGTCAAGAGGTGGCCCGACGTTGCAGTGTGGACCGTCTTCGTGCTCCGAGCA TCGCAGAGCGTACGGGAGGAGATCTTGATCCCTGGCCTGCCGTCCGTTGGCATGCTCGCTGGAGACGGATTCACGCACGG CATCGTTTCTCTGGCGGCGTATGGCCATGAAGCGGTCTTGCTAATCACTGTCCGAATCCATGATGGATGGAAGGGGCTGC CCCATCTTGGAGGGACCACGGTTGCAGCGCTCCCGTGGCATCCCGGGAAGCAGGAAGCGAAGGACCGTTGCTTCGGGCTG TGGAGTAGTCAACTCCGCAATCCGATGATCACTTGGGAACCGGCGGTGCCGTCCAGCCTGACGCCCACGCAAACGACGAG CGCGAAGCGCTTGGAAGACGACTTGGACCGCTTAGCTGACTTCACGGTGCAAGAAGGCGGCCTCCGGCCACGCCCGCCCG TACGGGAGTACGACGACTTTGCTGGCACCCCATTTGCGAAGCCAGAGCGCTGGACAGGCCGAGACGACTGA
Upstream 100 bases:
>100_bases CATCACCGAGGAATGCTAGTTCTCAGTCTCGTTCAAGGGAGTGGGTTGGCGGACGGAACTGTTTGCAAACTGCGAGCAGG CGTCCGGGGAGAATAGGCTC
Downstream 100 bases:
>100_bases CAGTGTTGTCGAAGTCCGCACGGGGGATTACTGCGGGCTCTTACTGTGTAGGAAGTCTTGAGGACCGGAGGTGGACATGC GGTACATGCTCGCCACAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSVEETETTSTDETRKPRAFHVGLMRRTRDTFEFKSAGVIGLSPDGGVFIAPMQAGPWRYGPLEGDISALPTSAETPYRP KLHYHRSGRAYATLSGQDLERKSLQLTRLPRLRYAQIFSLHCIRTWELPTRGKAPKLGDQLTAVKRWPDVAVWTVFVLRA SQSVREEILIPGLPSVGMLAGDGFTHGIVSLAAYGHEAVLLITVRIHDGWKGLPHLGGTTVAALPWHPGKQEAKDRCFGL WSSQLRNPMITWEPAVPSSLTPTQTTSAKRLEDDLDRLADFTVQEGGLRPRPPVREYDDFAGTPFAKPERWTGRDD
Sequences:
>Translated_316_residues MSVEETETTSTDETRKPRAFHVGLMRRTRDTFEFKSAGVIGLSPDGGVFIAPMQAGPWRYGPLEGDISALPTSAETPYRP KLHYHRSGRAYATLSGQDLERKSLQLTRLPRLRYAQIFSLHCIRTWELPTRGKAPKLGDQLTAVKRWPDVAVWTVFVLRA SQSVREEILIPGLPSVGMLAGDGFTHGIVSLAAYGHEAVLLITVRIHDGWKGLPHLGGTTVAALPWHPGKQEAKDRCFGL WSSQLRNPMITWEPAVPSSLTPTQTTSAKRLEDDLDRLADFTVQEGGLRPRPPVREYDDFAGTPFAKPERWTGRDD >Mature_315_residues SVEETETTSTDETRKPRAFHVGLMRRTRDTFEFKSAGVIGLSPDGGVFIAPMQAGPWRYGPLEGDISALPTSAETPYRPK LHYHRSGRAYATLSGQDLERKSLQLTRLPRLRYAQIFSLHCIRTWELPTRGKAPKLGDQLTAVKRWPDVAVWTVFVLRAS QSVREEILIPGLPSVGMLAGDGFTHGIVSLAAYGHEAVLLITVRIHDGWKGLPHLGGTTVAALPWHPGKQEAKDRCFGLW SSQLRNPMITWEPAVPSSLTPTQTTSAKRLEDDLDRLADFTVQEGGLRPRPPVREYDDFAGTPFAKPERWTGRDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35188; Mature: 35057
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEETETTSTDETRKPRAFHVGLMRRTRDTFEFKSAGVIGLSPDGGVFIAPMQAGPWRY CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEC GPLEGDISALPTSAETPYRPKLHYHRSGRAYATLSGQDLERKSLQLTRLPRLRYAQIFSL CCCCCCHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHEE HCIRTWELPTRGKAPKLGDQLTAVKRWPDVAVWTVFVLRASQSVREEILIPGLPSVGMLA EEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEE GDGFTHGIVSLAAYGHEAVLLITVRIHDGWKGLPHLGGTTVAALPWHPGKQEAKDRCFGL CCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH WSSQLRNPMITWEPAVPSSLTPTQTTSAKRLEDDLDRLADFTVQEGGLRPRPPVREYDDF HHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AGTPFAKPERWTGRDD CCCCCCCCCCCCCCCC >Mature Secondary Structure SVEETETTSTDETRKPRAFHVGLMRRTRDTFEFKSAGVIGLSPDGGVFIAPMQAGPWRY CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEC GPLEGDISALPTSAETPYRPKLHYHRSGRAYATLSGQDLERKSLQLTRLPRLRYAQIFSL CCCCCCHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHEE HCIRTWELPTRGKAPKLGDQLTAVKRWPDVAVWTVFVLRASQSVREEILIPGLPSVGMLA EEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEE GDGFTHGIVSLAAYGHEAVLLITVRIHDGWKGLPHLGGTTVAALPWHPGKQEAKDRCFGL CCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH WSSQLRNPMITWEPAVPSSLTPTQTTSAKRLEDDLDRLADFTVQEGGLRPRPPVREYDDF HHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AGTPFAKPERWTGRDD CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA