Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716201

Identifier: 119716201

GI number: 119716201

Start: 2098613

End: 2099647

Strand: Direct

Name: 119716201

Synonym: Noca_1969

Alternate gene names: NA

Gene position: 2098613-2099647 (Clockwise)

Preceding gene: 119716200

Following gene: 119716202

Centisome position: 42.09

GC content: 62.71

Gene sequence:

>1035_bases
ATGAGTGCCAGCCTGAAAGTGCCTACTGACAGGGGAGAACCAACCCGCGAATCAGGGGTAGGTATCGATACGCTCGCAGT
AGTCGGGCCCGTGCAGCTGCGGACTCTCCAAGAGCTCAGCACCATCTCGCACAAGCGGCTCATCGACCGTGACACCGCCG
AGATCACGGACTATGCACCATCGGGATTTCACTCCCTGAACATCGGCGCGGCGCGGGTGGGTGTGTCCGCCTGGGTGTCT
GGGGCCGGTCCTCAGATTCGACTGCAGGCGTCGATTCCTCGCATGCTGCTCGGTCACAACTGGGATGGCGTCAGCCCGGA
CGAGCTCCCTCGGGCTATGGAAGTTCTAATGCGTGGTGTCGCCGAGGCGCTACCGGACACCCCTCGACCTCATGAGGTCG
CGGTTACCAGGCTCGACCTGACGCGAGACTTCTACGGGGTCCGCGACGTGCCGGCGACGCTGACTGCAATCGCCCGTCAC
CCCATGGCCAACGTCAGAGTGAACCGGCGCGACTATCGAGAGGACGGGGTCACCCTTCAAACCCTCACTCGTGGTAATCG
GAGCTGGATCGCGCGGGGCTATGACAAGTGGTTCGAGTCGGCCAACTCCAAAGGTCCCGGGCTGCAGCGAGAGCTCGCCA
GGACGCGTCCTCAGCAGCTCAGGTTCGAGGTGGAGCTCAAGTCGAAGGCTCTCCGTTACCGGGGAATGACGAAGATCGCG
GATCTGCTCCGGTCGGACCTCATCGAGACGGCTCGTTACTACTTCGAGAGGTGCAAGTTCGACGTGAACACGGCGCAAAC
GGGACTCTCCGACCTGCTTGATCGTCTCGAAAGTGATGGAGTGAGCGCGGCTGATCGTCGAAACCTGGTCCTGTACCTGA
CCTGCGCCGACATGGGCGTGTCGCTACTCAGCCGTGGACCGTTCGAGCGTGCGCGGGCCCTGGCGAACAGGTATCGACTC
GGTCCCAACTCCCTCGGCAAGTCGACCTTCGAGCGACGCCTCGACTTCGACCTAGCGTCCGAGGTGGTGTGCTGA

Upstream 100 bases:

>100_bases
ACGAGCACATCGCGGAAGTGCTCGGACTGGGCCGGTCGATCCTGTCTTCCAAAGGTGGTGGGCAGGTCGGCATCGCCCTG
CTCCAGGTCGACGGTCCTGC

Downstream 100 bases:

>100_bases
ACCTGCGACGCAATCGACGGGCCCCGCGTTCAGTGCGTCGCGCTGACGTTGAGCGCTCCCGGGTCCAGCGCATCACCGAG
GAATGCTAGTTCTCAGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSASLKVPTDRGEPTRESGVGIDTLAVVGPVQLRTLQELSTISHKRLIDRDTAEITDYAPSGFHSLNIGAARVGVSAWVS
GAGPQIRLQASIPRMLLGHNWDGVSPDELPRAMEVLMRGVAEALPDTPRPHEVAVTRLDLTRDFYGVRDVPATLTAIARH
PMANVRVNRRDYREDGVTLQTLTRGNRSWIARGYDKWFESANSKGPGLQRELARTRPQQLRFEVELKSKALRYRGMTKIA
DLLRSDLIETARYYFERCKFDVNTAQTGLSDLLDRLESDGVSAADRRNLVLYLTCADMGVSLLSRGPFERARALANRYRL
GPNSLGKSTFERRLDFDLASEVVC

Sequences:

>Translated_344_residues
MSASLKVPTDRGEPTRESGVGIDTLAVVGPVQLRTLQELSTISHKRLIDRDTAEITDYAPSGFHSLNIGAARVGVSAWVS
GAGPQIRLQASIPRMLLGHNWDGVSPDELPRAMEVLMRGVAEALPDTPRPHEVAVTRLDLTRDFYGVRDVPATLTAIARH
PMANVRVNRRDYREDGVTLQTLTRGNRSWIARGYDKWFESANSKGPGLQRELARTRPQQLRFEVELKSKALRYRGMTKIA
DLLRSDLIETARYYFERCKFDVNTAQTGLSDLLDRLESDGVSAADRRNLVLYLTCADMGVSLLSRGPFERARALANRYRL
GPNSLGKSTFERRLDFDLASEVVC
>Mature_343_residues
SASLKVPTDRGEPTRESGVGIDTLAVVGPVQLRTLQELSTISHKRLIDRDTAEITDYAPSGFHSLNIGAARVGVSAWVSG
AGPQIRLQASIPRMLLGHNWDGVSPDELPRAMEVLMRGVAEALPDTPRPHEVAVTRLDLTRDFYGVRDVPATLTAIARHP
MANVRVNRRDYREDGVTLQTLTRGNRSWIARGYDKWFESANSKGPGLQRELARTRPQQLRFEVELKSKALRYRGMTKIAD
LLRSDLIETARYYFERCKFDVNTAQTGLSDLLDRLESDGVSAADRRNLVLYLTCADMGVSLLSRGPFERARALANRYRLG
PNSLGKSTFERRLDFDLASEVVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38381; Mature: 38250

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLKVPTDRGEPTRESGVGIDTLAVVGPVQLRTLQELSTISHKRLIDRDTAEITDYAP
CCCCCCCCCCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
SGFHSLNIGAARVGVSAWVSGAGPQIRLQASIPRMLLGHNWDGVSPDELPRAMEVLMRGV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
AEALPDTPRPHEVAVTRLDLTRDFYGVRDVPATLTAIARHPMANVRVNRRDYREDGVTLQ
HHHCCCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHCCHHCEEECCHHHHHCCCEEE
TLTRGNRSWIARGYDKWFESANSKGPGLQRELARTRPQQLRFEVELKSKALRYRGMTKIA
EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHEEEEEEHHHHHHHHCCHHHHH
DLLRSDLIETARYYFERCKFDVNTAQTGLSDLLDRLESDGVSAADRRNLVLYLTCADMGV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHH
SLLSRGPFERARALANRYRLGPNSLGKSTFERRLDFDLASEVVC
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure 
SASLKVPTDRGEPTRESGVGIDTLAVVGPVQLRTLQELSTISHKRLIDRDTAEITDYAP
CCCCCCCCCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
SGFHSLNIGAARVGVSAWVSGAGPQIRLQASIPRMLLGHNWDGVSPDELPRAMEVLMRGV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
AEALPDTPRPHEVAVTRLDLTRDFYGVRDVPATLTAIARHPMANVRVNRRDYREDGVTLQ
HHHCCCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHCCHHCEEECCHHHHHCCCEEE
TLTRGNRSWIARGYDKWFESANSKGPGLQRELARTRPQQLRFEVELKSKALRYRGMTKIA
EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHEEEEEEHHHHHHHHCCHHHHH
DLLRSDLIETARYYFERCKFDVNTAQTGLSDLLDRLESDGVSAADRRNLVLYLTCADMGV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHH
SLLSRGPFERARALANRYRLGPNSLGKSTFERRLDFDLASEVVC
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA