| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hemA2
Identifier: 119716194
GI number: 119716194
Start: 2091934
End: 2093280
Strand: Direct
Name: hemA2
Synonym: Noca_1962
Alternate gene names: 119716194
Gene position: 2091934-2093280 (Clockwise)
Preceding gene: 119716193
Following gene: 119716196
Centisome position: 41.96
GC content: 77.51
Gene sequence:
>1347_bases ATGAGCCGGCTGACCTGCCTCGCGTTCCCGGGCCGCAGCATCCCGATGGCGGTCCTGGAGCGGCTCTCCGTCGCGGCGCG CGAGCTGCCCGCCAGCGTCCGGGCGCTCCGGGCGGTGCCGGGGGTCGACCAGGTGCTGGTGCTCTCGACCTGCGAGCGCA CGGAGGTCTACGCGTGGTGGACCGACGAGGCGGACCCGGCGGCGCTGCTGCGGGCACTCGCCGGGCAGCGCGGGCTGGGG CCGGAGCCGCTGCTCGAGCACGCCGTCGGCCTGACGGGTCGTGAGGCCGTGCAACACCTGCTCCGGGTCACCGCCGGACT CGACTCCTTCGTCCGCGGCGAGTCCGACATCGTCGGCCAGGTGCGGGCGGCGGTCCAGGCCGCTCGGGCGGAGGGTGCGG TCGGGCTGGAGGTGCAGCGGCTGGTCGACGCCGCCGTGAACACCTCGCGCCGGGTGCACCGCAGCACGGGCGCCGGGCTG GCCGCCGGCTCGGTCGCGTCGACCGCCGTCGCCGCCGTGGCCGGGCTGCTCCCCGACGGACTGGCCGGACGCGACCTGCT GGTCGTCGGCACCGGCCAGGTGGCCGTGAGCGTCGTCGCCGCCGCTCGGGAGGCCGGTGCCCGCCTGACGGTGTGCGGGC GGGACCCGGAGCGGGCCGCCGCGATCGCGCCGGCCGGGGCGCGGGTGCTCGGGTTGGACGATCTCCCGGGCGCGCTCCTC GACGCGGACGCCGTCGTGTTCGGCACGTCGTCGCCCGAGCGGCTGCTCCGTGCCGGCGACCTCGGACCGGGGTTGAGCGA GCACCGGTCCGGTCGTGAGCTCGTGGTCGTCGACCTGTGCGTGCCGCGCAACGTCGACCCGGACGTGCGGGGTGTGCCCG GGGTGCGACTGCTGGACCTCACCGACCTCCGCGGCGCCGCCGTACCGGGCCGGCGTCCGTCCGCCCCGGCGCCGGCGGCG CTGGAGCTGGCCGAGCAGATCGTCGCGCAGGAGGTGGACCGCTTCCTGCACTGGTGGGTGGACCGTGCGGCCGCGGAGCC GGTACGCCGCCTGCGCGCAGACGTCGAGGCGTGCGTCCGCGAGGAGGTCGCGCGAGCCACCCGGGGTCTCTCGCCCGACC TCGAGCCGCTCGTCGCCGAGGGGATCCGCCGGGCGGTGCAGCACCTCGCGCACGGGCCGACGCGTCGGCTCCTCGACGCC GCGGCAGCAGGCGAGGACGAGGTCGTCGCGCTGCTCGCCGGGCTGTTCGCGCCGTCGGCCGAGGAGGACCAGGCTGTCCC GGCCTACTCGCCCCAGCCCATCGGGAACACCTCGAACGCCGCGGCGAGCGCGACGCCGAGGCGCTGA
Upstream 100 bases:
>100_bases CCGAGCAGGACCTGCGTGCCTACCTCGACCGGGCACCGTTCGGCTCGCACCGCCAGACGGTCCGGGCCGTGCTCGCCCTC GTGCAGAAGGAGGGACGTCG
Downstream 100 bases:
>100_bases CCGGTCTGGCGGCCGAAGCCCTCGAGGAACTCGCGGGCGTCGAAGTGCTCCCAGCCGAGGCCGTCGATGTAGGCGCGGTG CGCCTCCAGGGAGGCGACCC
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR 2
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSRLTCLAFPGRSIPMAVLERLSVAARELPASVRALRAVPGVDQVLVLSTCERTEVYAWWTDEADPAALLRALAGQRGLG PEPLLEHAVGLTGREAVQHLLRVTAGLDSFVRGESDIVGQVRAAVQAARAEGAVGLEVQRLVDAAVNTSRRVHRSTGAGL AAGSVASTAVAAVAGLLPDGLAGRDLLVVGTGQVAVSVVAAAREAGARLTVCGRDPERAAAIAPAGARVLGLDDLPGALL DADAVVFGTSSPERLLRAGDLGPGLSEHRSGRELVVVDLCVPRNVDPDVRGVPGVRLLDLTDLRGAAVPGRRPSAPAPAA LELAEQIVAQEVDRFLHWWVDRAAAEPVRRLRADVEACVREEVARATRGLSPDLEPLVAEGIRRAVQHLAHGPTRRLLDA AAAGEDEVVALLAGLFAPSAEEDQAVPAYSPQPIGNTSNAAASATPRR
Sequences:
>Translated_448_residues MSRLTCLAFPGRSIPMAVLERLSVAARELPASVRALRAVPGVDQVLVLSTCERTEVYAWWTDEADPAALLRALAGQRGLG PEPLLEHAVGLTGREAVQHLLRVTAGLDSFVRGESDIVGQVRAAVQAARAEGAVGLEVQRLVDAAVNTSRRVHRSTGAGL AAGSVASTAVAAVAGLLPDGLAGRDLLVVGTGQVAVSVVAAAREAGARLTVCGRDPERAAAIAPAGARVLGLDDLPGALL DADAVVFGTSSPERLLRAGDLGPGLSEHRSGRELVVVDLCVPRNVDPDVRGVPGVRLLDLTDLRGAAVPGRRPSAPAPAA LELAEQIVAQEVDRFLHWWVDRAAAEPVRRLRADVEACVREEVARATRGLSPDLEPLVAEGIRRAVQHLAHGPTRRLLDA AAAGEDEVVALLAGLFAPSAEEDQAVPAYSPQPIGNTSNAAASATPRR >Mature_447_residues SRLTCLAFPGRSIPMAVLERLSVAARELPASVRALRAVPGVDQVLVLSTCERTEVYAWWTDEADPAALLRALAGQRGLGP EPLLEHAVGLTGREAVQHLLRVTAGLDSFVRGESDIVGQVRAAVQAARAEGAVGLEVQRLVDAAVNTSRRVHRSTGAGLA AGSVASTAVAAVAGLLPDGLAGRDLLVVGTGQVAVSVVAAAREAGARLTVCGRDPERAAAIAPAGARVLGLDDLPGALLD ADAVVFGTSSPERLLRAGDLGPGLSEHRSGRELVVVDLCVPRNVDPDVRGVPGVRLLDLTDLRGAAVPGRRPSAPAPAAL ELAEQIVAQEVDRFLHWWVDRAAAEPVRRLRADVEACVREEVARATRGLSPDLEPLVAEGIRRAVQHLAHGPTRRLLDAA AAGEDEVVALLAGLFAPSAEEDQAVPAYSPQPIGNTSNAAASATPRR
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=414, Percent_Identity=29.951690821256, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM12_NOCSJ (A1SI37)
Other databases:
- EMBL: CP000509 - RefSeq: YP_923159.1 - ProteinModelPortal: A1SI37 - SMR: A1SI37 - STRING: A1SI37 - GeneID: 4599868 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_1962 - eggNOG: COG0373 - OMA: RAVNEDI - PhylomeDB: A1SI37 - BioCyc: NSP35761:NOCA_1962-MONOMER - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 46538; Mature: 46406
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 51-51 BINDING 109-109 BINDING 120-120
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLTCLAFPGRSIPMAVLERLSVAARELPASVRALRAVPGVDQVLVLSTCERTEVYAWW CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE TDEADPAALLRALAGQRGLGPEPLLEHAVGLTGREAVQHLLRVTAGLDSFVRGESDIVGQ CCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VRAAVQAARAEGAVGLEVQRLVDAAVNTSRRVHRSTGAGLAAGSVASTAVAAVAGLLPDG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC LAGRDLLVVGTGQVAVSVVAAAREAGARLTVCGRDPERAAAIAPAGARVLGLDDLPGALL CCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHEECCCCCEEEECCCCCCHHH DADAVVFGTSSPERLLRAGDLGPGLSEHRSGRELVVVDLCVPRNVDPDVRGVPGVRLLDL CCCEEEECCCCHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEE TDLRGAAVPGRRPSAPAPAALELAEQIVAQEVDRFLHWWVDRAAAEPVRRLRADVEACVR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVARATRGLSPDLEPLVAEGIRRAVQHLAHGPTRRLLDAAAAGEDEVVALLAGLFAPSA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC EEDQAVPAYSPQPIGNTSNAAASATPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLTCLAFPGRSIPMAVLERLSVAARELPASVRALRAVPGVDQVLVLSTCERTEVYAWW CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE TDEADPAALLRALAGQRGLGPEPLLEHAVGLTGREAVQHLLRVTAGLDSFVRGESDIVGQ CCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VRAAVQAARAEGAVGLEVQRLVDAAVNTSRRVHRSTGAGLAAGSVASTAVAAVAGLLPDG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC LAGRDLLVVGTGQVAVSVVAAAREAGARLTVCGRDPERAAAIAPAGARVLGLDDLPGALL CCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHEECCCCCEEEECCCCCCHHH DADAVVFGTSSPERLLRAGDLGPGLSEHRSGRELVVVDLCVPRNVDPDVRGVPGVRLLDL CCCEEEECCCCHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEE TDLRGAAVPGRRPSAPAPAALELAEQIVAQEVDRFLHWWVDRAAAEPVRRLRADVEACVR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVARATRGLSPDLEPLVAEGIRRAVQHLAHGPTRRLLDAAAAGEDEVVALLAGLFAPSA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC EEDQAVPAYSPQPIGNTSNAAASATPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA