Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716193

Identifier: 119716193

GI number: 119716193

Start: 2091047

End: 2091937

Strand: Direct

Name: 119716193

Synonym: Noca_1961

Alternate gene names: NA

Gene position: 2091047-2091937 (Clockwise)

Preceding gene: 119716192

Following gene: 119716194

Centisome position: 41.94

GC content: 77.67

Gene sequence:

>891_bases
GTGACCCTCGCCCTCGTGGCCGGAGCGATCAGCGTGGTCGCGCTCGCCCTGCTGACCCGGCCGTTCCTGGCCGCGAGCCG
CGCCCCGCGGCCCTCCGGCGCGAGCACCCCCGACGTACGCCGACAGCTGCTGCGCCAGGTCCGCGACCTCGATGCCGAGC
GCGCGGCCGGCGAGCTGACGGACGCACAGCACGCCGCCCGCCGCCGCGCCCTGGAGGCCGAGCTCGCCCCACTGCTGCGC
GCCGAGCCGGTCGTGCGCGAACCCCGGGCCCCGGCGCGGAGCATGCGGACCCGGCGCGCGCGTTGGACCCGGCGGGTCGC
CGTCCTGGCGGTCCTCGCCACGGCCGCCACCGGAACCGCGGTCGTGCTCCGCAACACCGTCGAGCCCGAGCCGCCGGCGG
CGGCCGCGCCACCGGCGGCTGCCGCGGCCGCACCCGACGGCGCCTTCGCGACCCAGCCCACCGCAGCGGAGCTCGACGCC
GTCGACGCCGCGGTGCGACAGGTCCGCCGACAGCCGCAGTCCGTCGGCGCACACCTGGCCCTGGCGCACGCCTACACGCG
GGCGCGACAGCCGCAGCTGGCCACCGTCGAGTACCTCGCCACCCTGCGGATCGCGCCCGGCAACGCCGAGGCCAACACCG
CGCTGGCCCTGGTGGCGTTCACCTCCGGCAACGCCGAGCAGGCCAAGCCGATGGTCGACCGGGCCCTCCGCACCAGGCCG
GGCTATCCCGAGGCCCTCTACGTCCGCGGCCTGGTGCTCGCGATGGGGCTGAAGCGTCCGGCCGCCGCCGAGCAGGACCT
GCGTGCCTACCTCGACCGGGCACCGTTCGGCTCGCACCGCCAGACGGTCCGGGCCGTGCTCGCCCTCGTGCAGAAGGAGG
GACGTCGATGA

Upstream 100 bases:

>100_bases
TGAGCCGGACCGGGCTCGGCCTCGCCGGGCCGGAGCCCGGCTCACCGACCGACCGGGCCCTGGTCGACCGCGCGCTGGCC
GACCTGCTGAAGGAGGAGTC

Downstream 100 bases:

>100_bases
GCCGGCTGACCTGCCTCGCGTTCCCGGGCCGCAGCATCCCGATGGCGGTCCTGGAGCGGCTCTCCGTCGCGGCGCGCGAG
CTGCCCGCCAGCGTCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELTDAQHAARRRALEAELAPLLR
AEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTAVVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDA
VDAAVRQVRRQPQSVGAHLALAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP
GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR

Sequences:

>Translated_296_residues
MTLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELTDAQHAARRRALEAELAPLLR
AEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTAVVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDA
VDAAVRQVRRQPQSVGAHLALAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP
GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR
>Mature_295_residues
TLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELTDAQHAARRRALEAELAPLLRA
EPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTAVVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDAV
DAAVRQVRRQPQSVGAHLALAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRPG
YPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31489; Mature: 31357

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
DAQHAARRRALEAELAPLLRAEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTA
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDAVDAAVRQVRRQPQSVGAHLA
EEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
LAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP
HHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
DAQHAARRRALEAELAPLLRAEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTA
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDAVDAAVRQVRRQPQSVGAHLA
EEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
LAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP
HHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA