| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716193
Identifier: 119716193
GI number: 119716193
Start: 2091047
End: 2091937
Strand: Direct
Name: 119716193
Synonym: Noca_1961
Alternate gene names: NA
Gene position: 2091047-2091937 (Clockwise)
Preceding gene: 119716192
Following gene: 119716194
Centisome position: 41.94
GC content: 77.67
Gene sequence:
>891_bases GTGACCCTCGCCCTCGTGGCCGGAGCGATCAGCGTGGTCGCGCTCGCCCTGCTGACCCGGCCGTTCCTGGCCGCGAGCCG CGCCCCGCGGCCCTCCGGCGCGAGCACCCCCGACGTACGCCGACAGCTGCTGCGCCAGGTCCGCGACCTCGATGCCGAGC GCGCGGCCGGCGAGCTGACGGACGCACAGCACGCCGCCCGCCGCCGCGCCCTGGAGGCCGAGCTCGCCCCACTGCTGCGC GCCGAGCCGGTCGTGCGCGAACCCCGGGCCCCGGCGCGGAGCATGCGGACCCGGCGCGCGCGTTGGACCCGGCGGGTCGC CGTCCTGGCGGTCCTCGCCACGGCCGCCACCGGAACCGCGGTCGTGCTCCGCAACACCGTCGAGCCCGAGCCGCCGGCGG CGGCCGCGCCACCGGCGGCTGCCGCGGCCGCACCCGACGGCGCCTTCGCGACCCAGCCCACCGCAGCGGAGCTCGACGCC GTCGACGCCGCGGTGCGACAGGTCCGCCGACAGCCGCAGTCCGTCGGCGCACACCTGGCCCTGGCGCACGCCTACACGCG GGCGCGACAGCCGCAGCTGGCCACCGTCGAGTACCTCGCCACCCTGCGGATCGCGCCCGGCAACGCCGAGGCCAACACCG CGCTGGCCCTGGTGGCGTTCACCTCCGGCAACGCCGAGCAGGCCAAGCCGATGGTCGACCGGGCCCTCCGCACCAGGCCG GGCTATCCCGAGGCCCTCTACGTCCGCGGCCTGGTGCTCGCGATGGGGCTGAAGCGTCCGGCCGCCGCCGAGCAGGACCT GCGTGCCTACCTCGACCGGGCACCGTTCGGCTCGCACCGCCAGACGGTCCGGGCCGTGCTCGCCCTCGTGCAGAAGGAGG GACGTCGATGA
Upstream 100 bases:
>100_bases TGAGCCGGACCGGGCTCGGCCTCGCCGGGCCGGAGCCCGGCTCACCGACCGACCGGGCCCTGGTCGACCGCGCGCTGGCC GACCTGCTGAAGGAGGAGTC
Downstream 100 bases:
>100_bases GCCGGCTGACCTGCCTCGCGTTCCCGGGCCGCAGCATCCCGATGGCGGTCCTGGAGCGGCTCTCCGTCGCGGCGCGCGAG CTGCCCGCCAGCGTCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELTDAQHAARRRALEAELAPLLR AEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTAVVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDA VDAAVRQVRRQPQSVGAHLALAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR
Sequences:
>Translated_296_residues MTLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELTDAQHAARRRALEAELAPLLR AEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTAVVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDA VDAAVRQVRRQPQSVGAHLALAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR >Mature_295_residues TLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELTDAQHAARRRALEAELAPLLRA EPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTAVVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDAV DAAVRQVRRQPQSVGAHLALAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRPG YPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31489; Mature: 31357
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH DAQHAARRRALEAELAPLLRAEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTA HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDAVDAAVRQVRRQPQSVGAHLA EEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH LAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP HHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLALVAGAISVVALALLTRPFLAASRAPRPSGASTPDVRRQLLRQVRDLDAERAAGELT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH DAQHAARRRALEAELAPLLRAEPVVREPRAPARSMRTRRARWTRRVAVLAVLATAATGTA HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VVLRNTVEPEPPAAAAPPAAAAAAPDGAFATQPTAAELDAVDAAVRQVRRQPQSVGAHLA EEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH LAHAYTRARQPQLATVEYLATLRIAPGNAEANTALALVAFTSGNAEQAKPMVDRALRTRP HHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC GYPEALYVRGLVLAMGLKRPAAAEQDLRAYLDRAPFGSHRQTVRAVLALVQKEGRR CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA