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The map label for this gene is 119716185

Identifier: 119716185

GI number: 119716185

Start: 2084451

End: 2085113

Strand: Direct

Name: 119716185

Synonym: Noca_1953

Alternate gene names: NA

Gene position: 2084451-2085113 (Clockwise)

Preceding gene: 119716184

Following gene: 119716186

Centisome position: 41.81

GC content: 74.21

Gene sequence:

>663_bases
GTGACCGGCGGCGCGGTGTGGGCGGTCGCCGGCAAGGACCTGCGGGCCGAGGCGCGCAGCAAGTACGCCCTCGGCTCGGT
GCTGCCGTTCGCCGCGACCATGCTGCTCGCGTTCGGCTTCGCACTCGGCCCGGACCGGGTGCTGCTCGAGCGCGCGGCGC
CCGGTCTGCTCTGGCTCGCGGCCCTCTTCGCGGCCGTCGACCTGTTCCACCGCTCCTACCAGGCCGAGGCCGACGCGGGC
GCGCTCGACGGGCTCGTGCTGGCGCCGTTGCACAAGGGCGACATCTTCTTGGGCAAGGCCATCGCCGCCGCCGTCCAGGT
GCTGGTGCTCGTGCTGGGCACCGGCCTGATCGTCACGGTGCTGTTCGGGCTCGAGCTCGCCCGGGCACCCTTGCTGCTGC
TCACGGCCGTGCTCGGCGTCGCCGGGCTGAGCGCGCTGGGCAGCCTGTTCGGCCTGCTCACGGTCCTCGGCCGGCGCCAG
GCCGCTCTCCCGGTGCTGCTGCTGCCGCTCGTCACGCCCGTGCTGATCGCGGCCATCCGCGCGACCGCGACCCTGGTCGA
GGGCACCGCCGGCGTGGCCGGCTGGCTCGGCGTGCTCGCCGCCTTCGACGCGATGTTCCTCGCCGCGGGCTACCTGGTCT
TCGGGCATCTGCTTGAGGACTGA

Upstream 100 bases:

>100_bases
CCGTGCTCCTGGCCAGTCACGAGCAGCCGCCCACCGGCCTGGTGGACCGGCGCGTCGTCATGGACGCGGGCCGGGTGGTC
GCGCACGACGGAGCGCTGCG

Downstream 100 bases:

>100_bases
ACCATTTGCCGTTTGCTCTTGACAGCGCCCTCCGGCGAGCGTGACTCTCTCTAAGACACAAAAATGTGTCTGTTAGAGAG
AGGCATCACGCGATGGTCAA

Product: cytochrome c-type biogenesis protein CcmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTGGAVWAVAGKDLRAEARSKYALGSVLPFAATMLLAFGFALGPDRVLLERAAPGLLWLAALFAAVDLFHRSYQAEADAG
ALDGLVLAPLHKGDIFLGKAIAAAVQVLVLVLGTGLIVTVLFGLELARAPLLLLTAVLGVAGLSALGSLFGLLTVLGRRQ
AALPVLLLPLVTPVLIAAIRATATLVEGTAGVAGWLGVLAAFDAMFLAAGYLVFGHLLED

Sequences:

>Translated_220_residues
MTGGAVWAVAGKDLRAEARSKYALGSVLPFAATMLLAFGFALGPDRVLLERAAPGLLWLAALFAAVDLFHRSYQAEADAG
ALDGLVLAPLHKGDIFLGKAIAAAVQVLVLVLGTGLIVTVLFGLELARAPLLLLTAVLGVAGLSALGSLFGLLTVLGRRQ
AALPVLLLPLVTPVLIAAIRATATLVEGTAGVAGWLGVLAAFDAMFLAAGYLVFGHLLED
>Mature_219_residues
TGGAVWAVAGKDLRAEARSKYALGSVLPFAATMLLAFGFALGPDRVLLERAAPGLLWLAALFAAVDLFHRSYQAEADAGA
LDGLVLAPLHKGDIFLGKAIAAAVQVLVLVLGTGLIVTVLFGLELARAPLLLLTAVLGVAGLSALGSLFGLLTVLGRRQA
ALPVLLLPLVTPVLIAAIRATATLVEGTAGVAGWLGVLAAFDAMFLAAGYLVFGHLLED

Specific function: Unknown

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22486; Mature: 22355

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGAVWAVAGKDLRAEARSKYALGSVLPFAATMLLAFGFALGPDRVLLERAAPGLLWLA
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
ALFAAVDLFHRSYQAEADAGALDGLVLAPLHKGDIFLGKAIAAAVQVLVLVLGTGLIVTV
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGLELARAPLLLLTAVLGVAGLSALGSLFGLLTVLGRRQAALPVLLLPLVTPVLIAAIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ATATLVEGTAGVAGWLGVLAAFDAMFLAAGYLVFGHLLED
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGGAVWAVAGKDLRAEARSKYALGSVLPFAATMLLAFGFALGPDRVLLERAAPGLLWLA
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
ALFAAVDLFHRSYQAEADAGALDGLVLAPLHKGDIFLGKAIAAAVQVLVLVLGTGLIVTV
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGLELARAPLLLLTAVLGVAGLSALGSLFGLLTVLGRRQAALPVLLLPLVTPVLIAAIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ATATLVEGTAGVAGWLGVLAAFDAMFLAAGYLVFGHLLED
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA