| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716161
Identifier: 119716161
GI number: 119716161
Start: 2059104
End: 2059928
Strand: Direct
Name: 119716161
Synonym: Noca_1929
Alternate gene names: NA
Gene position: 2059104-2059928 (Clockwise)
Preceding gene: 119716159
Following gene: 119716162
Centisome position: 41.3
GC content: 76.48
Gene sequence:
>825_bases GTGGAGACGGAGGCCGGCCGTGATCGCCTCGAGTACACCGAGTACGGCTCCGGTGACGCGTGGGTGCTCCTGCTGCCCGG GGAGCTGATGCCGCGCCGGATGCAGCAGCCCCTGGCCCGGGTGCTCGCTGCGGAGGGGCTGCACGTGGTCACCCTCGACC CCCTCGGCCACGGCCGGTCCGACCGGCCGGCGGACCCGCACGCCTACTCGGTGACGGCGTTCGCCGAGCAGGCCGTCGCG CTCCTCGACCACCTGGGCGTCGCCCAGGCGGTGGTCGGCGGCACCGGGCTCGGCGCCAACGTCGCGCTCGAGGCCGCGGC GATCGCGTCCGGTCGGGTGCGCGGCCTGATCATCGACGCCCCGCTGCTCGACAACGGCGTGGAGGCCGGGATCCTCGCCT TCGGCCCGCTCCTGCTCGCCGCTCGCTTCCTGCCGCTCTCCGTCTGGGCCGTGCGCAGGCTGACCCGTCCGGTGCCGCGG GGGATCGTGCCGTTCTGGGCCGGCATCGCGCTCGACGCCTGCGACCAGCGGCCCGGGGCGATGGCGGCGCTGCTGCATGG GTTGTTCTTCGGCCGCGCGGCGCCCTCGGCCCGGGAACGCCGCGCGATCCCGGTGCCCGCGCTGGTCGTCGGCCACCCGG GCGACCCGATGCACCCGCTCGCCGACGCCAGGATGCTCGCCGAGGAGCTCCCGCGCGGGACCTTCGTGCGGGCACACTCG CTGCTCGAGTGGCGACTCACCCCCGAGCGTCTCGACCGGGCCGCGATCGGCCTGGCCACCGGGTGCTGGAAGACGCCGCG CCGCCACCGCCGCTCCGGCGCCTGA
Upstream 100 bases:
>100_bases CCGGAGCGCACGCTCCCACGCGCGGGGATCGGGGATCTGCCTGCCGCCGGTGGCCTATGTTGGGCCCATGCTGGTGTCGG AGCGGATCGGGCAGTTCTTC
Downstream 100 bases:
>100_bases AACGCGCACGCACCCGGCACAATGGAGGGGTGCTGTACCGCGACGAGGCGATCGTGCTCCGCACCCACAAGCTGGGTGAG GCTGACCGGATCGTCACCCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues METEAGRDRLEYTEYGSGDAWVLLLPGELMPRRMQQPLARVLAAEGLHVVTLDPLGHGRSDRPADPHAYSVTAFAEQAVA LLDHLGVAQAVVGGTGLGANVALEAAAIASGRVRGLIIDAPLLDNGVEAGILAFGPLLLAARFLPLSVWAVRRLTRPVPR GIVPFWAGIALDACDQRPGAMAALLHGLFFGRAAPSARERRAIPVPALVVGHPGDPMHPLADARMLAEELPRGTFVRAHS LLEWRLTPERLDRAAIGLATGCWKTPRRHRRSGA
Sequences:
>Translated_274_residues METEAGRDRLEYTEYGSGDAWVLLLPGELMPRRMQQPLARVLAAEGLHVVTLDPLGHGRSDRPADPHAYSVTAFAEQAVA LLDHLGVAQAVVGGTGLGANVALEAAAIASGRVRGLIIDAPLLDNGVEAGILAFGPLLLAARFLPLSVWAVRRLTRPVPR GIVPFWAGIALDACDQRPGAMAALLHGLFFGRAAPSARERRAIPVPALVVGHPGDPMHPLADARMLAEELPRGTFVRAHS LLEWRLTPERLDRAAIGLATGCWKTPRRHRRSGA >Mature_274_residues METEAGRDRLEYTEYGSGDAWVLLLPGELMPRRMQQPLARVLAAEGLHVVTLDPLGHGRSDRPADPHAYSVTAFAEQAVA LLDHLGVAQAVVGGTGLGANVALEAAAIASGRVRGLIIDAPLLDNGVEAGILAFGPLLLAARFLPLSVWAVRRLTRPVPR GIVPFWAGIALDACDQRPGAMAALLHGLFFGRAAPSARERRAIPVPALVVGHPGDPMHPLADARMLAEELPRGTFVRAHS LLEWRLTPERLDRAAIGLATGCWKTPRRHRRSGA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29284; Mature: 29284
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METEAGRDRLEYTEYGSGDAWVLLLPGELMPRRMQQPLARVLAAEGLHVVTLDPLGHGRS CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC DRPADPHAYSVTAFAEQAVALLDHLGVAQAVVGGTGLGANVALEAAAIASGRVRGLIIDA CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEC PLLDNGVEAGILAFGPLLLAARFLPLSVWAVRRLTRPVPRGIVPFWAGIALDACDQRPGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCH MAALLHGLFFGRAAPSARERRAIPVPALVVGHPGDPMHPLADARMLAEELPRGTFVRAHS HHHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEHHHH LLEWRLTPERLDRAAIGLATGCWKTPRRHRRSGA HHHEECCHHHHHHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure METEAGRDRLEYTEYGSGDAWVLLLPGELMPRRMQQPLARVLAAEGLHVVTLDPLGHGRS CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC DRPADPHAYSVTAFAEQAVALLDHLGVAQAVVGGTGLGANVALEAAAIASGRVRGLIIDA CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEC PLLDNGVEAGILAFGPLLLAARFLPLSVWAVRRLTRPVPRGIVPFWAGIALDACDQRPGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCH MAALLHGLFFGRAAPSARERRAIPVPALVVGHPGDPMHPLADARMLAEELPRGTFVRAHS HHHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEHHHH LLEWRLTPERLDRAAIGLATGCWKTPRRHRRSGA HHHEECCHHHHHHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA