Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is ybeZ [C]

Identifier: 119716144

GI number: 119716144

Start: 2039900

End: 2040937

Strand: Direct

Name: ybeZ [C]

Synonym: Noca_1912

Alternate gene names: 119716144

Gene position: 2039900-2040937 (Clockwise)

Preceding gene: 119716142

Following gene: 119716145

Centisome position: 40.91

GC content: 68.59

Gene sequence:

>1038_bases
ATGACAGACAGCAACCACCAGGGGGACCGCCCCGCGACCGCCACGCGGCACACGGTCGTGGTCCCCAACAGCATCAACAT
GGTCAGCCTGCTCGGGCCCGGCGACGAGCACCTCGGCGTGATCGAGCGGTCCTTCGACGCGGACGTCCACGTGCGCGGCA
ACCGGGTGGCGCTGTTCGGCGAGCCCGGCGAGGTGGCGCTGGCCGAGCGGCTCCTCGACGAGTTGGTCGCGATCATCCGC
ACCGGCCAGGGCGTGACGACCGAGACCGTCGAGCGAGTGATCTCGATGCTGCGTGCCGAGACCACGGAGCGCCCGGCCGA
CGTGCTCAGCCTCAACATCCTGAGCAACCGCGGCCGCTCGATCCGCCCGAAGACGCTGAACCAGAAGCGCTACGTCGACT
CGATCGACAAGCACACGATCACCTTCGGCATCGGCCCCGCCGGCACCGGCAAGACCTACCTCGCCGTCGCCAAGGCGGTG
CAGGCGCTGCAGTCGAAGAATGTCAACCGGATCATCCTCAGCCGCCCGGCGGTCGAGGCCGGTGAGCGGCTCGGCTTCCT
GCCGGGCACGCTCAGCGAGAAGATCGACCCCTACCTGCGGCCGCTCTACGACGCCCTGCACGACATGATCGACCCCGAGA
CGATCCCGAAGCTGCTCGCCGCCGGCACCATCGAGGTCGCGCCGCTGGCGTTCCTGCGCGGCCGGTCGCTCAACGACTCC
TTCATCATCCTCGACGAGGCACAGAACACCACGCCCGAGCAGATGAAGATGTTCCTCACCCGGCTCGGCTTCGGCTCGAA
GATCGTGGTCACCGGCGACGTCACCCAGACCGACCTCCCCGGGGGCCAGAAGTCCGGGCTGCGCGCGGTCGAGGAGATCC
TCGACGAGGTCGAGGACATCAGCTTCAACCGGCTCACCAGCCACGACGTCGTACGCCACAAGCTGGTCGGCAAGATCGTC
GCGGCCTACGACGACTTCGACGCCCGCTCCGGCCGTTCGCAGGAGCTCAAGCAGGCCAACCGCCCCGGGCCGCGTTGA

Upstream 100 bases:

>100_bases
CAGTCACGGTACTCGCAACTCGCTGGGCCGGTGCGGGGCCAGCCCGTACCATGGAAGGGCTCGATCGCCTATCGGAGAGG
GTGCCCCGCGCGGGGCTTCC

Downstream 100 bases:

>100_bases
GTCCCGGGAGCCACCGATGAGCATCGAGATCCTCAACGAGTCCGGGCATCCGCTGGACGTGAAGCGGCTTGCCGCGCTGA
GCCGGTTCGTGATGGACCGG

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTDSNHQGDRPATATRHTVVVPNSINMVSLLGPGDEHLGVIERSFDADVHVRGNRVALFGEPGEVALAERLLDELVAIIR
TGQGVTTETVERVISMLRAETTERPADVLSLNILSNRGRSIRPKTLNQKRYVDSIDKHTITFGIGPAGTGKTYLAVAKAV
QALQSKNVNRIILSRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALHDMIDPETIPKLLAAGTIEVAPLAFLRGRSLNDS
FIILDEAQNTTPEQMKMFLTRLGFGSKIVVTGDVTQTDLPGGQKSGLRAVEEILDEVEDISFNRLTSHDVVRHKLVGKIV
AAYDDFDARSGRSQELKQANRPGPR

Sequences:

>Translated_345_residues
MTDSNHQGDRPATATRHTVVVPNSINMVSLLGPGDEHLGVIERSFDADVHVRGNRVALFGEPGEVALAERLLDELVAIIR
TGQGVTTETVERVISMLRAETTERPADVLSLNILSNRGRSIRPKTLNQKRYVDSIDKHTITFGIGPAGTGKTYLAVAKAV
QALQSKNVNRIILSRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALHDMIDPETIPKLLAAGTIEVAPLAFLRGRSLNDS
FIILDEAQNTTPEQMKMFLTRLGFGSKIVVTGDVTQTDLPGGQKSGLRAVEEILDEVEDISFNRLTSHDVVRHKLVGKIV
AAYDDFDARSGRSQELKQANRPGPR
>Mature_344_residues
TDSNHQGDRPATATRHTVVVPNSINMVSLLGPGDEHLGVIERSFDADVHVRGNRVALFGEPGEVALAERLLDELVAIIRT
GQGVTTETVERVISMLRAETTERPADVLSLNILSNRGRSIRPKTLNQKRYVDSIDKHTITFGIGPAGTGKTYLAVAKAVQ
ALQSKNVNRIILSRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALHDMIDPETIPKLLAAGTIEVAPLAFLRGRSLNDSF
IILDEAQNTTPEQMKMFLTRLGFGSKIVVTGDVTQTDLPGGQKSGLRAVEEILDEVEDISFNRLTSHDVVRHKLVGKIVA
AYDDFDARSGRSQELKQANRPGPR

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=322, Percent_Identity=51.2422360248447, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI1787257, Length=198, Percent_Identity=44.4444444444444, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 37711; Mature: 37579

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSNHQGDRPATATRHTVVVPNSINMVSLLGPGDEHLGVIERSFDADVHVRGNRVALFG
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCEEEEEC
EPGEVALAERLLDELVAIIRTGQGVTTETVERVISMLRAETTERPADVLSLNILSNRGRS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEHHCCCCC
IRPKTLNQKRYVDSIDKHTITFGIGPAGTGKTYLAVAKAVQALQSKNVNRIILSRPAVEA
CCCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
GERLGFLPGTLSEKIDPYLRPLYDALHDMIDPETIPKLLAAGTIEVAPLAFLRGRSLNDS
HHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
FIILDEAQNTTPEQMKMFLTRLGFGSKIVVTGDVTQTDLPGGQKSGLRAVEEILDEVEDI
EEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC
SFNRLTSHDVVRHKLVGKIVAAYDDFDARSGRSQELKQANRPGPR
CCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
TDSNHQGDRPATATRHTVVVPNSINMVSLLGPGDEHLGVIERSFDADVHVRGNRVALFG
CCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCEEEEEC
EPGEVALAERLLDELVAIIRTGQGVTTETVERVISMLRAETTERPADVLSLNILSNRGRS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEHHCCCCC
IRPKTLNQKRYVDSIDKHTITFGIGPAGTGKTYLAVAKAVQALQSKNVNRIILSRPAVEA
CCCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
GERLGFLPGTLSEKIDPYLRPLYDALHDMIDPETIPKLLAAGTIEVAPLAFLRGRSLNDS
HHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
FIILDEAQNTTPEQMKMFLTRLGFGSKIVVTGDVTQTDLPGGQKSGLRAVEEILDEVEDI
EEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC
SFNRLTSHDVVRHKLVGKIVAAYDDFDARSGRSQELKQANRPGPR
CCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]