| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716098
Identifier: 119716098
GI number: 119716098
Start: 1990292
End: 1991209
Strand: Reverse
Name: 119716098
Synonym: Noca_1866
Alternate gene names: NA
Gene position: 1991209-1990292 (Counterclockwise)
Preceding gene: 119716099
Following gene: 119716094
Centisome position: 39.94
GC content: 72.11
Gene sequence:
>918_bases ATGCCCGCGAACGCCGCCTGGCCTGAGCTGCGGGTCGCCGACTGGCAGCCCACCCGGGACACCTTCACCCTCTGGCTGCA GGTGATCGGGAAGATCCGCATCGCCCGCACGCCGTTGCTCAACCACTGGTGGAACGCACCGTTGTACGTGACGGCCCGCG GGCTCACCACGTCGCTCGTGCCCGCCGAGCCCGGGCGCGGCTTCGCGATCGACCTCGATCTCCTCCGGCACCGGCTCGAC GTCACGACTACGCGCGGGGAGACCCGGACCATGGCGCTCGAGCCGCGGTCGGTGCGGGACTTCCACGCCGAGCTCGTCGG GCTGCTGGACGACCTCGGCCTCACGACGGAGATCTGGCCGGTGCCGGTCGAGCTGCCCGACGCGATCCCGTTCCCCGAGG ATGAGAGGCACAGCGCGTACGACGCCGAGGCGGTGACGGCGTTCTGGCGCACGCTCGTGGAGGTCGAGCGGGTGCTGACG GTGTTCCGGTCGCGGTACCTGGGCAAGTCCAGCCCGGTGCACCTGTTCTGGGGTGCGCTCGACCTGGCGACTACCCGCTT CTCCGGTCGCACCGCCCCGCCCCACCCCGGCGGCATGCCCAACTGCGGCCCCCACGTCATGCAGGAGGCCTACTCCCACG AGGTGAGCAGCGCCGGTTACTGGCCCGGCGGCGAGGGCGAGGGGATGTTCTACTCCTACGCCTACCCCGAGGCGCCCGGC TACCGCAGCCTGGCGGGCGGTCCGGAGGGCACCCGGTTCGACGACGAGCTCGGGGAGTTCGTGCTGCCCTACACCGCGGT GCGCATCGCGGCCGACCCCGATGCCGTGCTGCTCGACTTCCTGCAGCGCACCTACGAGGCGGCCGCGACCACCGGTGGAT GGGACCGCGCTGGGCTGGAGCGACCTCCCGGGTCGTGA
Upstream 100 bases:
>100_bases CGAGGAGTCGCGCACGTGACCCGGTCGCGAGGACCGGCCTGGCTACAGTCGTCGTCGACGGCCCGCGCCGCCACGGCGCC GTCGTACCGGAGGGAGAGCG
Downstream 100 bases:
>100_bases GTGGGCCTACCTGCGCATCAGGGTTCGAACCGGTAGCCCATGCCGGGCTCGGTCCTGAAGTACCTGGGACGGGACGGATC CGGCTCGAGCTTGCGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPANAAWPELRVADWQPTRDTFTLWLQVIGKIRIARTPLLNHWWNAPLYVTARGLTTSLVPAEPGRGFAIDLDLLRHRLD VTTTRGETRTMALEPRSVRDFHAELVGLLDDLGLTTEIWPVPVELPDAIPFPEDERHSAYDAEAVTAFWRTLVEVERVLT VFRSRYLGKSSPVHLFWGALDLATTRFSGRTAPPHPGGMPNCGPHVMQEAYSHEVSSAGYWPGGEGEGMFYSYAYPEAPG YRSLAGGPEGTRFDDELGEFVLPYTAVRIAADPDAVLLDFLQRTYEAAATTGGWDRAGLERPPGS
Sequences:
>Translated_305_residues MPANAAWPELRVADWQPTRDTFTLWLQVIGKIRIARTPLLNHWWNAPLYVTARGLTTSLVPAEPGRGFAIDLDLLRHRLD VTTTRGETRTMALEPRSVRDFHAELVGLLDDLGLTTEIWPVPVELPDAIPFPEDERHSAYDAEAVTAFWRTLVEVERVLT VFRSRYLGKSSPVHLFWGALDLATTRFSGRTAPPHPGGMPNCGPHVMQEAYSHEVSSAGYWPGGEGEGMFYSYAYPEAPG YRSLAGGPEGTRFDDELGEFVLPYTAVRIAADPDAVLLDFLQRTYEAAATTGGWDRAGLERPPGS >Mature_304_residues PANAAWPELRVADWQPTRDTFTLWLQVIGKIRIARTPLLNHWWNAPLYVTARGLTTSLVPAEPGRGFAIDLDLLRHRLDV TTTRGETRTMALEPRSVRDFHAELVGLLDDLGLTTEIWPVPVELPDAIPFPEDERHSAYDAEAVTAFWRTLVEVERVLTV FRSRYLGKSSPVHLFWGALDLATTRFSGRTAPPHPGGMPNCGPHVMQEAYSHEVSSAGYWPGGEGEGMFYSYAYPEAPGY RSLAGGPEGTRFDDELGEFVLPYTAVRIAADPDAVLLDFLQRTYEAAATTGGWDRAGLERPPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33832; Mature: 33701
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANAAWPELRVADWQPTRDTFTLWLQVIGKIRIARTPLLNHWWNAPLYVTARGLTTSLV CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCEEECC PAEPGRGFAIDLDLLRHRLDVTTTRGETRTMALEPRSVRDFHAELVGLLDDLGLTTEIWP CCCCCCCEEEEHHHHHHHHCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEECC VPVELPDAIPFPEDERHSAYDAEAVTAFWRTLVEVERVLTVFRSRYLGKSSPVHLFWGAL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH DLATTRFSGRTAPPHPGGMPNCGPHVMQEAYSHEVSSAGYWPGGEGEGMFYSYAYPEAPG HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC YRSLAGGPEGTRFDDELGEFVLPYTAVRIAADPDAVLLDFLQRTYEAAATTGGWDRAGLE CCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC RPPGS CCCCC >Mature Secondary Structure PANAAWPELRVADWQPTRDTFTLWLQVIGKIRIARTPLLNHWWNAPLYVTARGLTTSLV CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCEEECC PAEPGRGFAIDLDLLRHRLDVTTTRGETRTMALEPRSVRDFHAELVGLLDDLGLTTEIWP CCCCCCCEEEEHHHHHHHHCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEECC VPVELPDAIPFPEDERHSAYDAEAVTAFWRTLVEVERVLTVFRSRYLGKSSPVHLFWGAL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH DLATTRFSGRTAPPHPGGMPNCGPHVMQEAYSHEVSSAGYWPGGEGEGMFYSYAYPEAPG HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC YRSLAGGPEGTRFDDELGEFVLPYTAVRIAADPDAVLLDFLQRTYEAAATTGGWDRAGLE CCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC RPPGS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA