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The map label for this gene is yngJ [H]

Identifier: 119716065

GI number: 119716065

Start: 1953312

End: 1954547

Strand: Direct

Name: yngJ [H]

Synonym: Noca_1832

Alternate gene names: 119716065

Gene position: 1953312-1954547 (Clockwise)

Preceding gene: 119716064

Following gene: 119716066

Centisome position: 39.18

GC content: 70.79

Gene sequence:

>1236_bases
ATGGATTTCGGCTACGACGCCCGCACGGAGGACCTGCGGGAGAACCTGCTCGACTTCATGGACTCGCACGTCTACCCGGC
GGAGGCGGTCTTCCACGAGCAGCTGGCGGCTCAGGAGAACCGGTGGGCCTGGGACGCCGCCCCCGTGATGGGCGAGCTGC
GTGCCGCCGCGCGGGCGCGCGGGCTCTGGAACCTCTTCCTGCCCGGTGACGAGGGCGCCGGTCTGACCAACCTCCAGTAC
GCCCCGTTGGCCGAGATCGCCGGTCGCAGCCTGCTGCTCGCGCCACCCGCGATGAACTGTGCCGCGCCGGACACCGGCAA
CGTGGAGGTGCTGCACCTGTTCGGCACTGCGGAGCAGAAGGAGCAGTGGCTGAAGCCGCTGCTCGACGGCGAGATCCGGT
CCTCGTTCGCGATGACCGAGCCGGACGTCGCCTCCTCCGACGCCACGAACATCGGGACGTCCATCGTCCGCGACGGCGAC
GAGTACGTGATCAACGGGCGCAAGTGGTGGATCACGGGGGCGATGAACCCGAACGCCGCGATCTTCATCGTGATGGGGAA
GACCGACCCGACCGCGTCCCGGCACCGGCAGCAGTCGATGATCCTGGTCCCGCGCGACGCTGAGGGGCTGGAGATCAAGC
GCGGCATGCACGTGCTCGGCTACGACGACCACGACCACGGTGGCCACGCCGAGCTGGAGTTCCACGACGTCAGGGTCCCG
GCCGCGAACCTGATCGCCGGCGAGGGCGAGGGCTTCGCGATCGCGCAGGCCCGGTTGGGCCCCGGGCGGATCCACCACTG
CATGCGGTCCATCGGAGCCGCGGAGCGGGCCCTGGAGCTGATGTGCGCCCGGGTCGACGACCGGGTCGCCTTCGGCAAGC
CGCTCTCGGAGCAGGGCGTCGTGCGGGACTGGATCGCCGAGTCCCGCATCCGGATCGAGCAGCTGCGGCTGCTCACCCTC
AAGGCCGCCTGGCTGATGGACACCGTCGGCAACAAGGGTGCCCACACGGAGATCCAGGCGATCAAGATCGCCGCGCCCGC
GACCGTGCAATGGATCCTGGACAAGGCGATCCAGGCGCACGGCGCGGGTGGGCTGTCGCAGGACTTCCCGCTCGCGGCGT
CGTACGCCGGCATCCGCACGCTGCGCCTAGCCGACGGGCCGGATGAGGTGCACAAGGACGCCCTCGCCCGCGCGGAGCTC
CGCCGCCAGCAGGCGGCGCGGGCGACCACGCGCTAG

Upstream 100 bases:

>100_bases
TCCAGCAGGGCCAGACGGTGGGCGCCGGCTTCGAGGGCGTCGGTGCCGTCACCGCACCTCTGCTCGACCTCGGCATCTCT
TCGACGAAGGAGCTCGACTG

Downstream 100 bases:

>100_bases
TCCGCGCACTCCGGGTAACGTAAAGGTCGCCGGTGCTGCCTTTCGTCGCCTACGCTGTGCGAGCAAGCGCTTAGTAGATG
GAGGAGTGCCTCATGGCAAG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MDFGYDARTEDLRENLLDFMDSHVYPAEAVFHEQLAAQENRWAWDAAPVMGELRAAARARGLWNLFLPGDEGAGLTNLQY
APLAEIAGRSLLLAPPAMNCAAPDTGNVEVLHLFGTAEQKEQWLKPLLDGEIRSSFAMTEPDVASSDATNIGTSIVRDGD
EYVINGRKWWITGAMNPNAAIFIVMGKTDPTASRHRQQSMILVPRDAEGLEIKRGMHVLGYDDHDHGGHAELEFHDVRVP
AANLIAGEGEGFAIAQARLGPGRIHHCMRSIGAAERALELMCARVDDRVAFGKPLSEQGVVRDWIAESRIRIEQLRLLTL
KAAWLMDTVGNKGAHTEIQAIKIAAPATVQWILDKAIQAHGAGGLSQDFPLAASYAGIRTLRLADGPDEVHKDALARAEL
RRQQAARATTR

Sequences:

>Translated_411_residues
MDFGYDARTEDLRENLLDFMDSHVYPAEAVFHEQLAAQENRWAWDAAPVMGELRAAARARGLWNLFLPGDEGAGLTNLQY
APLAEIAGRSLLLAPPAMNCAAPDTGNVEVLHLFGTAEQKEQWLKPLLDGEIRSSFAMTEPDVASSDATNIGTSIVRDGD
EYVINGRKWWITGAMNPNAAIFIVMGKTDPTASRHRQQSMILVPRDAEGLEIKRGMHVLGYDDHDHGGHAELEFHDVRVP
AANLIAGEGEGFAIAQARLGPGRIHHCMRSIGAAERALELMCARVDDRVAFGKPLSEQGVVRDWIAESRIRIEQLRLLTL
KAAWLMDTVGNKGAHTEIQAIKIAAPATVQWILDKAIQAHGAGGLSQDFPLAASYAGIRTLRLADGPDEVHKDALARAEL
RRQQAARATTR
>Mature_411_residues
MDFGYDARTEDLRENLLDFMDSHVYPAEAVFHEQLAAQENRWAWDAAPVMGELRAAARARGLWNLFLPGDEGAGLTNLQY
APLAEIAGRSLLLAPPAMNCAAPDTGNVEVLHLFGTAEQKEQWLKPLLDGEIRSSFAMTEPDVASSDATNIGTSIVRDGD
EYVINGRKWWITGAMNPNAAIFIVMGKTDPTASRHRQQSMILVPRDAEGLEIKRGMHVLGYDDHDHGGHAELEFHDVRVP
AANLIAGEGEGFAIAQARLGPGRIHHCMRSIGAAERALELMCARVDDRVAFGKPLSEQGVVRDWIAESRIRIEQLRLLTL
KAAWLMDTVGNKGAHTEIQAIKIAAPATVQWILDKAIQAHGAGGLSQDFPLAASYAGIRTLRLADGPDEVHKDALARAEL
RRQQAARATTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=395, Percent_Identity=57.4683544303797, Blast_Score=444, Evalue=1e-125,
Organism=Homo sapiens, GI211971008, Length=399, Percent_Identity=54.1353383458647, Blast_Score=418, Evalue=1e-117,
Organism=Homo sapiens, GI48976061, Length=399, Percent_Identity=54.3859649122807, Blast_Score=418, Evalue=1e-117,
Organism=Homo sapiens, GI4557233, Length=394, Percent_Identity=30.9644670050761, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4557231, Length=290, Percent_Identity=27.2413793103448, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI187960098, Length=290, Percent_Identity=27.2413793103448, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI21361497, Length=406, Percent_Identity=25.615763546798, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4501859, Length=304, Percent_Identity=28.9473684210526, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI7656849, Length=288, Percent_Identity=29.5138888888889, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=27.6214833759591, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4557235, Length=391, Percent_Identity=27.6214833759591, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI226958412, Length=398, Percent_Identity=24.8743718592965, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI226958414, Length=285, Percent_Identity=27.3684210526316, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI4501857, Length=309, Percent_Identity=27.5080906148867, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI87081958, Length=315, Percent_Identity=26.6666666666667, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786223, Length=289, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=405, Percent_Identity=48.641975308642, Blast_Score=367, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17534899, Length=419, Percent_Identity=26.7303102625298, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17570075, Length=408, Percent_Identity=25.9803921568627, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=418, Percent_Identity=25.3588516746411, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=407, Percent_Identity=26.7813267813268, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=339, Percent_Identity=28.9085545722714, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=314, Percent_Identity=27.7070063694268, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17551932, Length=291, Percent_Identity=26.8041237113402, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=297, Percent_Identity=27.2727272727273, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=297, Percent_Identity=26.5993265993266, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=256, Percent_Identity=30.859375, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=284, Percent_Identity=25.7042253521127, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=211, Percent_Identity=28.9099526066351, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71982178, Length=186, Percent_Identity=31.7204301075269, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=188, Percent_Identity=30.3191489361702, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24646207, Length=287, Percent_Identity=31.3588850174216, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21356377, Length=398, Percent_Identity=28.643216080402, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281363737, Length=340, Percent_Identity=28.2352941176471, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24660351, Length=285, Percent_Identity=28.7719298245614, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24666513, Length=296, Percent_Identity=29.0540540540541, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21355753, Length=396, Percent_Identity=24.2424242424242, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44962; Mature: 44962

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGYDARTEDLRENLLDFMDSHVYPAEAVFHEQLAAQENRWAWDAAPVMGELRAAARAR
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GLWNLFLPGDEGAGLTNLQYAPLAEIAGRSLLLAPPAMNCAAPDTGNVEVLHLFGTAEQK
CCEEEEECCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEECCCHHH
EQWLKPLLDGEIRSSFAMTEPDVASSDATNIGTSIVRDGDEYVINGRKWWITGAMNPNAA
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCEEEEEEECCCCCCE
IFIVMGKTDPTASRHRQQSMILVPRDAEGLEIKRGMHVLGYDDHDHGGHAELEFHDVRVP
EEEEECCCCCCHHHHHCCCEEEEECCCCCCCHHCCCEEECCCCCCCCCCEEEEEEEEECC
AANLIAGEGEGFAIAQARLGPGRIHHCMRSIGAAERALELMCARVDDRVAFGKPLSEQGV
HHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCH
VRDWIAESRIRIEQLRLLTLKAAWLMDTVGNKGAHTEIQAIKIAAPATVQWILDKAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHC
GAGGLSQDFPLAASYAGIRTLRLADGPDEVHKDALARAELRRQQAARATTR
CCCCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFGYDARTEDLRENLLDFMDSHVYPAEAVFHEQLAAQENRWAWDAAPVMGELRAAARAR
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GLWNLFLPGDEGAGLTNLQYAPLAEIAGRSLLLAPPAMNCAAPDTGNVEVLHLFGTAEQK
CCEEEEECCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEECCCHHH
EQWLKPLLDGEIRSSFAMTEPDVASSDATNIGTSIVRDGDEYVINGRKWWITGAMNPNAA
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCEEEEEEECCCCCCE
IFIVMGKTDPTASRHRQQSMILVPRDAEGLEIKRGMHVLGYDDHDHGGHAELEFHDVRVP
EEEEECCCCCCHHHHHCCCEEEEECCCCCCCHHCCCEEECCCCCCCCCCEEEEEEEEECC
AANLIAGEGEGFAIAQARLGPGRIHHCMRSIGAAERALELMCARVDDRVAFGKPLSEQGV
HHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCH
VRDWIAESRIRIEQLRLLTLKAAWLMDTVGNKGAHTEIQAIKIAAPATVQWILDKAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHC
GAGGLSQDFPLAASYAGIRTLRLADGPDEVHKDALARAELRRQQAARATTR
CCCCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]