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The map label for this gene is 119716066

Identifier: 119716066

GI number: 119716066

Start: 1954640

End: 1955350

Strand: Direct

Name: 119716066

Synonym: Noca_1833

Alternate gene names: NA

Gene position: 1954640-1955350 (Clockwise)

Preceding gene: 119716065

Following gene: 119716069

Centisome position: 39.2

GC content: 69.2

Gene sequence:

>711_bases
ATGGCAAGGAAGCCCGACGCGCTCGGCGAAGCCGGTGCACGCCGGATGGCGTTCCAGCGCGAGCACGAGTACGTGTCCCC
CCGGGGACTGTTCGACGACGTCGAGCCCAAGGGGTCGCGTCGGTTCCTGACCGCCGCCGTCGCGGCGTTCAACGGCCGCG
GCTACCACGCGACGACCACGCGCGACATCGCCACCCTGGCGGGTTCGAGCCCGGCCGGGATCTACACGTACTACGCGACC
AAGGCCGATCTGCTCTACGAGATCGCGGTGATCGCGCACCAGTACATCCTCGACGAGACGCTGGCCGCGGTCGCGTCGGC
GTCCGACCCGATCGGCCGGATCAGCGAGATCGTCCGGCGGTCGGTGACCTACCACGCCGAGGAGCACGTCCTCGCCCGCG
TGGTGAACACCGACTTCCGCTCGCTCGAGGTGCAGCGGCTGGCCACGATCATGAAGATGCGGCGGCAGATCAGCCGGGTG
GTGCACGACGAGGTGCAGCGCGGCGTCGACCTGGGCGTGTTCCACGTCGCCCACGTCGATGGCGCCGCGATCGCGATCCT
GCGCCTGATGGACGTGGCGCCCTGGTACAACGAGCGCGGACCGATGTCCCCGAGCGAGCTCGCCGAGGTCTACCTCGGGC
TCATCTTGAACATGCTCCGCGCCGATCGCTCAGATGACGGACGCGACCGAGATGCCGCCGTCAACGGGTAG

Upstream 100 bases:

>100_bases
CGCGCTAGTCCGCGCACTCCGGGTAACGTAAAGGTCGCCGGTGCTGCCTTTCGTCGCCTACGCTGTGCGAGCAAGCGCTT
AGTAGATGGAGGAGTGCCTC

Downstream 100 bases:

>100_bases
CACCACGCCGGTCACGTACGCCGAGGCCCGCGCAGCCAGGTAGACGATTGCGCCGGCGATGTCGTCGTCGGCGCCGATGC
GCCCCATGGGTGCCACCTCC

Product: regulatory protein TetR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; HTH-Type Transcriptional Repressor; Transcriptional Regulator TetR Family Protein

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MARKPDALGEAGARRMAFQREHEYVSPRGLFDDVEPKGSRRFLTAAVAAFNGRGYHATTTRDIATLAGSSPAGIYTYYAT
KADLLYEIAVIAHQYILDETLAAVASASDPIGRISEIVRRSVTYHAEEHVLARVVNTDFRSLEVQRLATIMKMRRQISRV
VHDEVQRGVDLGVFHVAHVDGAAIAILRLMDVAPWYNERGPMSPSELAEVYLGLILNMLRADRSDDGRDRDAAVNG

Sequences:

>Translated_236_residues
MARKPDALGEAGARRMAFQREHEYVSPRGLFDDVEPKGSRRFLTAAVAAFNGRGYHATTTRDIATLAGSSPAGIYTYYAT
KADLLYEIAVIAHQYILDETLAAVASASDPIGRISEIVRRSVTYHAEEHVLARVVNTDFRSLEVQRLATIMKMRRQISRV
VHDEVQRGVDLGVFHVAHVDGAAIAILRLMDVAPWYNERGPMSPSELAEVYLGLILNMLRADRSDDGRDRDAAVNG
>Mature_235_residues
ARKPDALGEAGARRMAFQREHEYVSPRGLFDDVEPKGSRRFLTAAVAAFNGRGYHATTTRDIATLAGSSPAGIYTYYATK
ADLLYEIAVIAHQYILDETLAAVASASDPIGRISEIVRRSVTYHAEEHVLARVVNTDFRSLEVQRLATIMKMRRQISRVV
HDEVQRGVDLGVFHVAHVDGAAIAILRLMDVAPWYNERGPMSPSELAEVYLGLILNMLRADRSDDGRDRDAAVNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26110; Mature: 25979

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKPDALGEAGARRMAFQREHEYVSPRGLFDDVEPKGSRRFLTAAVAAFNGRGYHATTT
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH
RDIATLAGSSPAGIYTYYATKADLLYEIAVIAHQYILDETLAAVASASDPIGRISEIVRR
HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SVTYHAEEHVLARVVNTDFRSLEVQRLATIMKMRRQISRVVHDEVQRGVDLGVFHVAHVD
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAAIAILRLMDVAPWYNERGPMSPSELAEVYLGLILNMLRADRSDDGRDRDAAVNG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARKPDALGEAGARRMAFQREHEYVSPRGLFDDVEPKGSRRFLTAAVAAFNGRGYHATTT
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH
RDIATLAGSSPAGIYTYYATKADLLYEIAVIAHQYILDETLAAVASASDPIGRISEIVRR
HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SVTYHAEEHVLARVVNTDFRSLEVQRLATIMKMRRQISRVVHDEVQRGVDLGVFHVAHVD
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAAIAILRLMDVAPWYNERGPMSPSELAEVYLGLILNMLRADRSDDGRDRDAAVNG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA