| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716057
Identifier: 119716057
GI number: 119716057
Start: 1942853
End: 1943476
Strand: Direct
Name: 119716057
Synonym: Noca_1823
Alternate gene names: NA
Gene position: 1942853-1943476 (Clockwise)
Preceding gene: 119716056
Following gene: 119716062
Centisome position: 38.97
GC content: 65.54
Gene sequence:
>624_bases ATGGGGGGCAGGACCCCCTCGTCCGGTCAGCAATCTCTTGACCGTGACAGGAGCGTGCTCCCGTGTTCGAAACAGCAGAT CAACGTCCAGGCGGCGGTTCCTGATGGCCTGGGCGGATGCCCATGGCACCGGCTTCCGCGGTGTCTACCGCGGACCGAAC GGCGCCAAGCTCAAGACCAAGACGTTCAAGAGCAGATCCATGCCCGGTTCAAGGTTCTCCAGGCCTGCCTCGCCGCCCGC AAGGGCGTGTCAGCCCGTCGTGATCGGCTCATCCAGTACAACCCGTGCGAGAGCACTCAGCTGCCGGTGATCCCCGAGCG CGAGGTCACCATCCTGGAGCCGGACCAGGTCGACAAGATCCTCCTGGCCCTCGACCCCTGGTGGCGGCTCCTGCCGCTGT TGCTCTCGGAGACCGGACTCCGCTGGGGTGAGGCCATGGGCCTGACTGTGGACTCGTTCACGCTGGACTTCCGGTGCCTG TTCGTGCGCAGAACGACCATCGAGACCAAGGTCGAGCAGACCGGCAACGGCACTCGCTTCAGGTGGAAGCCCTATCCGGG CGAGGCAGCCCTGTGGCTTGTGCGTGACCATGCTGCTGCCGCAAGGCTGAGTCCGGCTGGGTAG
Upstream 100 bases:
>100_bases GGTCAGGGGTTCGAGTCCCCTCAGCTCCACCGAGGACGCGCAGGTCAGGGGCGGTTTCCCGGAGACGGGGGATCGCCTCT CAGCGTCTCTTGGGGGGCAA
Downstream 100 bases:
>100_bases CGCCGCTCGATCCAATGCGCCGGCCGGGGCGGTCCGGTGCTGGCTGGCGGCCCGGACGGCTCAGTTCATGCGGTGCTGCT CGTGAAGGAAGGTCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MGGRTPSSGQQSLDRDRSVLPCSKQQINVQAAVPDGLGGCPWHRLPRCLPRTERRQAQDQDVQEQIHARFKVLQACLAAR KGVSARRDRLIQYNPCESTQLPVIPEREVTILEPDQVDKILLALDPWWRLLPLLLSETGLRWGEAMGLTVDSFTLDFRCL FVRRTTIETKVEQTGNGTRFRWKPYPGEAALWLVRDHAAAARLSPAG
Sequences:
>Translated_207_residues MGGRTPSSGQQSLDRDRSVLPCSKQQINVQAAVPDGLGGCPWHRLPRCLPRTERRQAQDQDVQEQIHARFKVLQACLAAR KGVSARRDRLIQYNPCESTQLPVIPEREVTILEPDQVDKILLALDPWWRLLPLLLSETGLRWGEAMGLTVDSFTLDFRCL FVRRTTIETKVEQTGNGTRFRWKPYPGEAALWLVRDHAAAARLSPAG >Mature_206_residues GGRTPSSGQQSLDRDRSVLPCSKQQINVQAAVPDGLGGCPWHRLPRCLPRTERRQAQDQDVQEQIHARFKVLQACLAARK GVSARRDRLIQYNPCESTQLPVIPEREVTILEPDQVDKILLALDPWWRLLPLLLSETGLRWGEAMGLTVDSFTLDFRCLF VRRTTIETKVEQTGNGTRFRWKPYPGEAALWLVRDHAAAARLSPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23375; Mature: 23244
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRTPSSGQQSLDRDRSVLPCSKQQINVQAAVPDGLGGCPWHRLPRCLPRTERRQAQDQ CCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHH DVQEQIHARFKVLQACLAARKGVSARRDRLIQYNPCESTQLPVIPEREVTILEPDQVDKI HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCCCCCCEEEECCCCCCEE LLALDPWWRLLPLLLSETGLRWGEAMGLTVDSFTLDFRCLFVRRTTIETKVEQTGNGTRF EEEECCHHHHHHHHHHHCCCCCCCCCCCEEECEEEEEEEEEEEHHHHHHHHHHCCCCCEE RWKPYPGEAALWLVRDHAAAARLSPAG EEECCCCCEEEEEEECCHHHCCCCCCC >Mature Secondary Structure GGRTPSSGQQSLDRDRSVLPCSKQQINVQAAVPDGLGGCPWHRLPRCLPRTERRQAQDQ CCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHH DVQEQIHARFKVLQACLAARKGVSARRDRLIQYNPCESTQLPVIPEREVTILEPDQVDKI HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCCCCCCEEEECCCCCCEE LLALDPWWRLLPLLLSETGLRWGEAMGLTVDSFTLDFRCLFVRRTTIETKVEQTGNGTRF EEEECCHHHHHHHHHHHCCCCCCCCCCCEEECEEEEEEEEEEEHHHHHHHHHHCCCCCEE RWKPYPGEAALWLVRDHAAAARLSPAG EEECCCCCEEEEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA