| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716039
Identifier: 119716039
GI number: 119716039
Start: 1917728
End: 1918489
Strand: Reverse
Name: 119716039
Synonym: Noca_1805
Alternate gene names: NA
Gene position: 1918489-1917728 (Counterclockwise)
Preceding gene: 119716040
Following gene: 119716030
Centisome position: 38.48
GC content: 73.75
Gene sequence:
>762_bases GTGACCGAGCCGACGACAGCCGTGACCACCGTCGCGGAGGGGATCGCCCGGATCTCCTGGGCGCCCGACCAGCCGGTCGA CGTCGTCCGGCACCAGGTCGCCGCCGCGCTGGTCGAGCACGCGCGGGTCGAGGCGCTGGTCGACCCCGACGACCAGACCG CCCAGCGGGTCGCCACGTGGTCGGGACTGCGCCGCGAGGGCGTGATGCGCGGGGTCACCGTCGAGGGCCGGACCGTCGAC CGGATCGTCTACGCCCGGCTCGCCACCGACCTGCCCGTGCACGAGCCCGAGGGCTTCCGCGCCCTCCTCAACTCCTTCCT CCCCCGCAAGCGCGCGATCAGCCAGATGCTGCTGCGCGACCGCGACGAGCGGGTGCTCCTGTGCCAGCTGACCTACAAGC AGGACTGGGACCTGCCCGGCGGCGTGGTCGAGGTGGGCGAGTCGCCCCAGCTCGCGGTCACCCGGGAGGTGGAAGAGGAG CTCGGGCTGCACATCGAGACCGGGCGGCTGCTGCTCACCGACTGGCTGCCGCCGTGGAGCGGCTGGGACGACGCACTGTG CCTGGTGTTCGACGGCGGACAGCACGATGCCGCGATCACCGAGACGATCGTCCGGCAGACCCGCGAGATCCGCGCCACCG AGTTCTGCACGCCCGACCAGGTGCGCGAGCGCTGCGCCGACTTCACCGCCCGCCGGATCGGCTCCGCCGTCGCCAACCTC GCCGGCCCGGGCCCGGCGTACACGGAGTCGGGCGGACGCTAG
Upstream 100 bases:
>100_bases CGCGGTCGAGGGCGAGTGGTCGGGCCAGCCCGCCCACGCCACCCTCGTGGTGCCGCCGCTGGCGACGGTGTGGTTGCGCC GACGACACTAGAGTCTCCCC
Downstream 100 bases:
>100_bases GCGTGGCCAGTTTCATCGGCCGGCCGATGAACCTCTCGCTTGGACGATGAAGCCTTATCGTCCAGGCACGAGTCTTGTCG GCCGGCCGATGAAACTCGCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Bifunctional Protein; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Pyrophosphohydrolase; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; PE-PGRS Family Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTEPTTAVTTVAEGIARISWAPDQPVDVVRHQVAAALVEHARVEALVDPDDQTAQRVATWSGLRREGVMRGVTVEGRTVD RIVYARLATDLPVHEPEGFRALLNSFLPRKRAISQMLLRDRDERVLLCQLTYKQDWDLPGGVVEVGESPQLAVTREVEEE LGLHIETGRLLLTDWLPPWSGWDDALCLVFDGGQHDAAITETIVRQTREIRATEFCTPDQVRERCADFTARRIGSAVANL AGPGPAYTESGGR
Sequences:
>Translated_253_residues MTEPTTAVTTVAEGIARISWAPDQPVDVVRHQVAAALVEHARVEALVDPDDQTAQRVATWSGLRREGVMRGVTVEGRTVD RIVYARLATDLPVHEPEGFRALLNSFLPRKRAISQMLLRDRDERVLLCQLTYKQDWDLPGGVVEVGESPQLAVTREVEEE LGLHIETGRLLLTDWLPPWSGWDDALCLVFDGGQHDAAITETIVRQTREIRATEFCTPDQVRERCADFTARRIGSAVANL AGPGPAYTESGGR >Mature_252_residues TEPTTAVTTVAEGIARISWAPDQPVDVVRHQVAAALVEHARVEALVDPDDQTAQRVATWSGLRREGVMRGVTVEGRTVDR IVYARLATDLPVHEPEGFRALLNSFLPRKRAISQMLLRDRDERVLLCQLTYKQDWDLPGGVVEVGESPQLAVTREVEEEL GLHIETGRLLLTDWLPPWSGWDDALCLVFDGGQHDAAITETIVRQTREIRATEFCTPDQVRERCADFTARRIGSAVANLA GPGPAYTESGGR
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28014; Mature: 27883
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPTTAVTTVAEGIARISWAPDQPVDVVRHQVAAALVEHARVEALVDPDDQTAQRVATW CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHH SGLRREGVMRGVTVEGRTVDRIVYARLATDLPVHEPEGFRALLNSFLPRKRAISQMLLRD HHHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHC RDERVLLCQLTYKQDWDLPGGVVEVGESPQLAVTREVEEELGLHIETGRLLLTDWLPPWS CCCEEEEEEEECCCCCCCCCCEEECCCCCCEEHHHHHHHHCCCEEECCCEEEEECCCCCC GWDDALCLVFDGGQHDAAITETIVRQTREIRATEFCTPDQVRERCADFTARRIGSAVANL CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AGPGPAYTESGGR CCCCCCCCCCCCC >Mature Secondary Structure TEPTTAVTTVAEGIARISWAPDQPVDVVRHQVAAALVEHARVEALVDPDDQTAQRVATW CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHH SGLRREGVMRGVTVEGRTVDRIVYARLATDLPVHEPEGFRALLNSFLPRKRAISQMLLRD HHHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHC RDERVLLCQLTYKQDWDLPGGVVEVGESPQLAVTREVEEELGLHIETGRLLLTDWLPPWS CCCEEEEEEEECCCCCCCCCCEEECCCCCCEEHHHHHHHHCCCEEECCCEEEEECCCCCC GWDDALCLVFDGGQHDAAITETIVRQTREIRATEFCTPDQVRERCADFTARRIGSAVANL CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AGPGPAYTESGGR CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA