| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716026
Identifier: 119716026
GI number: 119716026
Start: 1903997
End: 1904941
Strand: Direct
Name: 119716026
Synonym: Noca_1792
Alternate gene names: NA
Gene position: 1903997-1904941 (Clockwise)
Preceding gene: 119716024
Following gene: 119716031
Centisome position: 38.19
GC content: 75.98
Gene sequence:
>945_bases GTGCCCGCCACGGGCGGCTCCCGGCTGCTGAGCGGGCTGGGCTTCGCGTTGCTCTCGGCCGTCTCCTTCGGGATGTCCGG CGCCCTCGCTCGGGAGCTCCTCGACGCCGGCTGGAGCGCCGGCGCGATCGTGCTGGTGCGCGTCGGCCTGGCCGCGCTGG TCGTCGTCCCGTTCGGCCTGGTCGCGTTGCGCGGCCGGTGGGGCCTGCTGCGCCGCAACGCCGGCGTGGTCGCGGTGTAC GGCGCGCTGGCCGTCGCGGGGGCGCAGTTCTGCTACTTCTCGGCGGTCGCCCACATGCAGGTCGGGCCGGCGCTGCTGAT CGAGTACACCGCACCCGCCGCGGTGGTGGTGTGGCTGTGGCTGCGGCACGGGCAGCGCCCCGGGTCGATCACCCTCGTGG GCGCCGCCCTCGCCGCCGCCGGGCTGGTGCTGGTGCTCGACCTGCTCTCCGGGGCCGACCTGAGCGTCCCCGGGGTGCTC TGGGCATTGGCGGCGATGGTCGGCGCGGCGACGTACTTCGTGATCTCCGCCGACGAGCGCAGCGGCCTGCCGCCGATGGT GCTGGCCGCGGCCGGGCTGGTGCTCGGTGCCGCCGTGCTCGCCGCGCTCGGGGTCGTCGGGCTGCTGCCGATGCGCGCGT CGACCGACGCCGTCACCTACGCCGGCCGCACCGTCGACTGGTGGGTGCCGCTGCTCGTGCTCGGCGTGGTGACGGCCGCC ATCGCCTACACCAGCGGGATCGCCGCGGCACGGCGGCTCGGCTCGCGGCTCGCGTCCTTCGTCGCGCTGATCGAGGTCCT GGCCGGCGTGGGGTTCGCCTGGCTGCTGCTCGACGAGCTCCCGCGGGCCGTACAGCTGGTGGGCGGCCTGCTGATCCTGG CCGGGGTCGTCGCCGTCAAGCTCGGCGAGCGCACGACCGCGGCCGTCCCCACACCGGTTCCCTGA
Upstream 100 bases:
>100_bases CGGTGTCATGGGTGAACGGCACGTTGACAGGTTACACGACGTGGCACTAGCGTCATGTGTCATGGCGACGTTGGCCCATG ACGAGGCATCCGATCGGCTG
Downstream 100 bases:
>100_bases CGCGGCGCCGGCTCGGAGAGGCCGCGCGGCCGGTGAACCGGAAAGTCGTGCCGTTTGGTCACCAACGGCGGTGTGGGAGC GTTCCCGGCTTGCGGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPATGGSRLLSGLGFALLSAVSFGMSGALARELLDAGWSAGAIVLVRVGLAALVVVPFGLVALRGRWGLLRRNAGVVAVY GALAVAGAQFCYFSAVAHMQVGPALLIEYTAPAAVVVWLWLRHGQRPGSITLVGAALAAAGLVLVLDLLSGADLSVPGVL WALAAMVGAATYFVISADERSGLPPMVLAAAGLVLGAAVLAALGVVGLLPMRASTDAVTYAGRTVDWWVPLLVLGVVTAA IAYTSGIAAARRLGSRLASFVALIEVLAGVGFAWLLLDELPRAVQLVGGLLILAGVVAVKLGERTTAAVPTPVP
Sequences:
>Translated_314_residues MPATGGSRLLSGLGFALLSAVSFGMSGALARELLDAGWSAGAIVLVRVGLAALVVVPFGLVALRGRWGLLRRNAGVVAVY GALAVAGAQFCYFSAVAHMQVGPALLIEYTAPAAVVVWLWLRHGQRPGSITLVGAALAAAGLVLVLDLLSGADLSVPGVL WALAAMVGAATYFVISADERSGLPPMVLAAAGLVLGAAVLAALGVVGLLPMRASTDAVTYAGRTVDWWVPLLVLGVVTAA IAYTSGIAAARRLGSRLASFVALIEVLAGVGFAWLLLDELPRAVQLVGGLLILAGVVAVKLGERTTAAVPTPVP >Mature_313_residues PATGGSRLLSGLGFALLSAVSFGMSGALARELLDAGWSAGAIVLVRVGLAALVVVPFGLVALRGRWGLLRRNAGVVAVYG ALAVAGAQFCYFSAVAHMQVGPALLIEYTAPAAVVVWLWLRHGQRPGSITLVGAALAAAGLVLVLDLLSGADLSVPGVLW ALAAMVGAATYFVISADERSGLPPMVLAAAGLVLGAAVLAALGVVGLLPMRASTDAVTYAGRTVDWWVPLLVLGVVTAAI AYTSGIAAARRLGSRLASFVALIEVLAGVGFAWLLLDELPRAVQLVGGLLILAGVVAVKLGERTTAAVPTPVP
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31695; Mature: 31564
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATGGSRLLSGLGFALLSAVSFGMSGALARELLDAGWSAGAIVLVRVGLAALVVVPFGL CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VALRGRWGLLRRNAGVVAVYGALAVAGAQFCYFSAVAHMQVGPALLIEYTAPAAVVVWLW HHHHCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHH LRHGQRPGSITLVGAALAAAGLVLVLDLLSGADLSVPGVLWALAAMVGAATYFVISADER HHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCC SGLPPMVLAAAGLVLGAAVLAALGVVGLLPMRASTDAVTYAGRTVDWWVPLLVLGVVTAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH IAYTSGIAAARRLGSRLASFVALIEVLAGVGFAWLLLDELPRAVQLVGGLLILAGVVAVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGERTTAAVPTPVP CCCCCCCCCCCCCC >Mature Secondary Structure PATGGSRLLSGLGFALLSAVSFGMSGALARELLDAGWSAGAIVLVRVGLAALVVVPFGL CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VALRGRWGLLRRNAGVVAVYGALAVAGAQFCYFSAVAHMQVGPALLIEYTAPAAVVVWLW HHHHCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHH LRHGQRPGSITLVGAALAAAGLVLVLDLLSGADLSVPGVLWALAAMVGAATYFVISADER HHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCC SGLPPMVLAAAGLVLGAAVLAALGVVGLLPMRASTDAVTYAGRTVDWWVPLLVLGVVTAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH IAYTSGIAAARRLGSRLASFVALIEVLAGVGFAWLLLDELPRAVQLVGGLLILAGVVAVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGERTTAAVPTPVP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA