| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716012
Identifier: 119716012
GI number: 119716012
Start: 1886982
End: 1887560
Strand: Reverse
Name: 119716012
Synonym: Noca_1777
Alternate gene names: NA
Gene position: 1887560-1886982 (Counterclockwise)
Preceding gene: 119716013
Following gene: 119716005
Centisome position: 37.86
GC content: 73.58
Gene sequence:
>579_bases GTGCGGACTAGGGCCGGGCGACGGATCGGTCTGGTCCTCGTCACACTCCTCGGCCTGCTGGCGGCGGGCGGGTTCGCCCT GGCCCGCTCCGCTCCGTCGTTGAGCGCAGGCGGCCCGACCTCGGTCGCCGGCACCGAGGCGACCGGCGTGTTCGAGATCG CCGACCGTACCGTGCGGCAGGTCCGGTACGACGACGGCGGGACGCTGCGCTACACCTTCGAGCTGACCAACGACGACCGG TTCCCGGTCACCGTCCACGGCCTGGCGGCCGACCAGCCGCCGAGCCGGCTGTTCACCTACTCCGGGTTGGCCGACGCCGC CGGCCGTTCGACGCTGCGGCTGTCCCCCGGCGAGTCCGTTCCGGTCACCCTGTCCCTGCTGATGGGCGGCTGCGAGACGC TCTCGGCGCGGGCCGGGGCCTTCGTCACCGCGGTGGTGCTGCGCATCGAGCGCGCCGGCATGCTCACCGGACTCCCTGCT GACAACGTCACCGTCACCCTGCCCGAGGAACTGCACACCGGCTCGCCGCGCGAGGCGTTCTGCCCCAACTCGACGGCCAC CTCCCGGCCCCCGGGATGA
Upstream 100 bases:
>100_bases GCTCCGGGTCGGCCCGCCTCCGGCACGGTGCTGGTGGCCCCGATCGCGATGACGGCCGGCGCGCTCGCGTTGGTCCTGGG CCTGCGCCGCCGGTGGTCGC
Downstream 100 bases:
>100_bases CCGAGACGGCTACTGGTCACCGCTAGGGACAGGAGCTGCCCCTGGGCAGCTTGTACGGCGCGGAGATCCGGTAGGTGCCG GCTCGCGGCGCGTGCAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRTRAGRRIGLVLVTLLGLLAAGGFALARSAPSLSAGGPTSVAGTEATGVFEIADRTVRQVRYDDGGTLRYTFELTNDDR FPVTVHGLAADQPPSRLFTYSGLADAAGRSTLRLSPGESVPVTLSLLMGGCETLSARAGAFVTAVVLRIERAGMLTGLPA DNVTVTLPEELHTGSPREAFCPNSTATSRPPG
Sequences:
>Translated_192_residues MRTRAGRRIGLVLVTLLGLLAAGGFALARSAPSLSAGGPTSVAGTEATGVFEIADRTVRQVRYDDGGTLRYTFELTNDDR FPVTVHGLAADQPPSRLFTYSGLADAAGRSTLRLSPGESVPVTLSLLMGGCETLSARAGAFVTAVVLRIERAGMLTGLPA DNVTVTLPEELHTGSPREAFCPNSTATSRPPG >Mature_192_residues MRTRAGRRIGLVLVTLLGLLAAGGFALARSAPSLSAGGPTSVAGTEATGVFEIADRTVRQVRYDDGGTLRYTFELTNDDR FPVTVHGLAADQPPSRLFTYSGLADAAGRSTLRLSPGESVPVTLSLLMGGCETLSARAGAFVTAVVLRIERAGMLTGLPA DNVTVTLPEELHTGSPREAFCPNSTATSRPPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19942; Mature: 19942
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRAGRRIGLVLVTLLGLLAAGGFALARSAPSLSAGGPTSVAGTEATGVFEIADRTVRQ CCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VRYDDGGTLRYTFELTNDDRFPVTVHGLAADQPPSRLFTYSGLADAAGRSTLRLSPGESV EEECCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHEEEECCCCCCCCCCEEEECCCCCC PVTLSLLMGGCETLSARAGAFVTAVVLRIERAGMLTGLPADNVTVTLPEELHTGSPREAF CEEHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHCCCCCCCCC CPNSTATSRPPG CCCCCCCCCCCC >Mature Secondary Structure MRTRAGRRIGLVLVTLLGLLAAGGFALARSAPSLSAGGPTSVAGTEATGVFEIADRTVRQ CCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VRYDDGGTLRYTFELTNDDRFPVTVHGLAADQPPSRLFTYSGLADAAGRSTLRLSPGESV EEECCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHEEEECCCCCCCCCCEEEECCCCCC PVTLSLLMGGCETLSARAGAFVTAVVLRIERAGMLTGLPADNVTVTLPEELHTGSPREAF CEEHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHCCCCCCCCC CPNSTATSRPPG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA