| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716013
Identifier: 119716013
GI number: 119716013
Start: 1887550
End: 1889430
Strand: Reverse
Name: 119716013
Synonym: Noca_1778
Alternate gene names: NA
Gene position: 1889430-1887550 (Counterclockwise)
Preceding gene: 119716014
Following gene: 119716012
Centisome position: 37.9
GC content: 70.33
Gene sequence:
>1881_bases ATGACGCGCCGAGCTGCTGCCCCCCTCCCGGTCTCCCCCCCGGCCCCCATCCCGGCCTGCGTGGCCGTCCTCCTGGTCGC CGCGGCGACCGTGCTGACGATGCTCGCCGGAGCACCACCCGCCGGCGCCCACGAGGAGCGGCCCGCGCAGTTCCCCGACG GCACCGGGCACCGGCCGTCGTTCCTCGGCTTCGACAACCCCCGCCAGCGGGTCGTGTGCGGGTCCGACAGCGGCCGGCTG ATCGCGGCGCTTCCCGAGGGCGCGGTCAAGGACCGCAACGAGCGGCTGCTCGACTCGTGCCGGTACCGGTCCATCCAGGA CGCGATCGACTCGGTCCGCAAGCGGCAGACCTCCGTGTACGTGCTGCCGGGGACCTACCACGAGGCGAAGTGGGCGCGCG CGGAGCGCAGCGACTACTGCTCGCACCTGCAGACCTCGTCGACCTCGCCGCTGCCGTTCTCGGAGTACATCGGCAGCCTG TCCTCGCCCGACCCCGGTGCCGAGCAGGCCGCCGCGGACTCCGGCGAGTCCAACCCGATCGCGTTGTCCTACGCCGACCA GCGGCGCTGCGCCCACAACCTGAACCTGATCGCGGTCTTCGGTGACCGGACACCGGGCAACGACAGCATCCGCTGCGACA GCCGGTTCTGCGGCCTCCAGCTGGTCGGCACCGGGCAGACACCGGCCGACGTGGTCGTCGACAACCGGTTCGCCAAGCTC AACGCGATCCGCGCGGACCGGGCCGGCGGCTTCTACCTGAGCAACATGACCTTCCAGCAGGCCGAGTTCAACGCGATCTA CGTCCTGGAGACCGACGGCTTCGTCATCGACCGGGTGGTCGCCCGCGGCAACGACGAGTACGGCGTCCTCGCGTTCGCGA GCGACCACGGCCTGATCGAGGACTCCGAGGCGTACTACAACGGCGACTCCGGCATCTACCCGGGCTCCGGATCCGACCTC AACGCCGACAACACGGAGTTCGAGGCGACCCGCTACGCGATCGAGATCCGCGGCAACAACAGCCACGACAACACGCTGGG CTACTCCGGCACGGCCGGCAACTCGATCTGGGCCCACGACAACGACTTCCACGACAACGCCACCGGCATCGCGACCGACT CGCTGTTCCCCGGACACCCGGGCCTGCCGCAGGACCACGCGCGCTGGAACCGCAACCGGATCTACTCCAACAACTCCAAC TGGTACACCGAGTTCGTCGACACCGGCGTCTGCGACAAGCCGATGGAGCAGCGCGGCTACATGGACGGCACGGTCTGCCC GGTGGTGCCGACGCCGGTCGGCACCGGCGTCCTGATCGCGGGCGGCAACTACGACTCGACCGACCACAACTGGATCTACG ACAACTGGCGCTACGGCACCATGCAGTTCTGGGTGCCCGCCCCCCTGCGCGACGACTACGACCCGTCGCACCTCTACGAC ACGTCGAACCACAACCACACCTTCGAGAACCAGATGGGCATCGACCCGCAGGGCCACGAGCAGCCGAACGGGATGGACCA CTGGTGGGACGACCAGGGCGTGGGCAACTGCTGGGAGGACAACCACTACGGCTCGGCCGGCCAGACCGACAACTTCACGG TTCCGCCGCCCTCCTGCGCCGACGGCGGCTCGGTCTTCCTGCCCGGCGCGACGGTGAAGGACGCCGGCTTCCTCAGCTGC AGCCAGTACGACCGCAGCGACCCGACCTGGAAGCACCCGCCCGCGTGCGAGTGGTTCGACAGCCCCAGCAAGCCCGCGCG GGCCGTGGCCGCTCCGGGTCGGCCCGCCTCCGGCACGGTGCTGGTGGCCCCGATCGCGATGACGGCCGGCGCGCTCGCGT TGGTCCTGGGCCTGCGCCGCCGGTGGTCGCGTGCGGACTAG
Upstream 100 bases:
>100_bases GCGCTGGCTGCGCTCCTGAGCGGGCGCCGGCGCCACCATGACCGGCGCGTAACCCCGGGAAGCGCGGGGTCGTTGGGGGA TCCGACGGAAAGGTCCTGCG
Downstream 100 bases:
>100_bases GGCCGGGCGACGGATCGGTCTGGTCCTCGTCACACTCCTCGGCCTGCTGGCGGCGGGCGGGTTCGCCCTGGCCCGCTCCG CTCCGTCGTTGAGCGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MTRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPSFLGFDNPRQRVVCGSDSGRL IAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVYVLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSL SSPDPGAEQAAADSGESNPIALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIEDSEAYYNGDSGIYPGSGSDL NADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHDNDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSN WYTEFVDTGVCDKPMEQRGYMDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCADGGSVFLPGATVKDAGFLSC SQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTVLVAPIAMTAGALALVLGLRRRWSRAD
Sequences:
>Translated_626_residues MTRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPSFLGFDNPRQRVVCGSDSGRL IAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVYVLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSL SSPDPGAEQAAADSGESNPIALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIEDSEAYYNGDSGIYPGSGSDL NADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHDNDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSN WYTEFVDTGVCDKPMEQRGYMDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCADGGSVFLPGATVKDAGFLSC SQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTVLVAPIAMTAGALALVLGLRRRWSRAD >Mature_625_residues TRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPSFLGFDNPRQRVVCGSDSGRLI AALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVYVLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSLS SPDPGAEQAAADSGESNPIALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKLN AIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIEDSEAYYNGDSGIYPGSGSDLN ADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHDNDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSNW YTEFVDTGVCDKPMEQRGYMDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYDT SNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCADGGSVFLPGATVKDAGFLSCS QYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTVLVAPIAMTAGALALVLGLRRRWSRAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68017; Mature: 67886
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC FLGFDNPRQRVVCGSDSGRLIAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVY CCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE VLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSLSSPDPGAEQAAADSGESNPI EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCE ALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL EEEECHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCEEEEECCCCCHHEEECCCHHHH NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIE EEEEECCCCCEEEECCEEECCCCCEEEEEECCCEEEEHHHHCCCCCEEEEEEECCCCCCC DSEAYYNGDSGIYPGSGSDLNADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHD CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCC NDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSNWYTEFVDTGVCDKPMEQRGY CCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEECCCCCCCCCHHHCCC MDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCEEECEEEEEECCCCCCCCCHHHEEC TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCA CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGGSVFLPGATVKDAGFLSCSQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTV CCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCE LVAPIAMTAGALALVLGLRRRWSRAD EEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC FLGFDNPRQRVVCGSDSGRLIAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVY CCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE VLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSLSSPDPGAEQAAADSGESNPI EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCE ALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL EEEECHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCEEEEECCCCCHHEEECCCHHHH NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIE EEEEECCCCCEEEECCEEECCCCCEEEEEECCCEEEEHHHHCCCCCEEEEEEECCCCCCC DSEAYYNGDSGIYPGSGSDLNADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHD CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCC NDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSNWYTEFVDTGVCDKPMEQRGY CCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEECCCCCCCCCHHHCCC MDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCEEECEEEEEECCCCCCCCCHHHEEC TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCA CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGGSVFLPGATVKDAGFLSCSQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTV CCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCE LVAPIAMTAGALALVLGLRRRWSRAD EEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA