| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716010
Identifier: 119716010
GI number: 119716010
Start: 1884093
End: 1885151
Strand: Direct
Name: 119716010
Synonym: Noca_1775
Alternate gene names: NA
Gene position: 1884093-1885151 (Clockwise)
Preceding gene: 119716009
Following gene: 119716011
Centisome position: 37.79
GC content: 70.92
Gene sequence:
>1059_bases GTGGGTGCTGGGATCTCCGGACGCGAGGCGCTCCGACTGACCGCGTGGGTGTGGGCGCTCACGGCGGTCTTCGCGTCCGT GGCGCTGCTGCGGTCCGAGCACCTCGGGATCCCGTTCCGCGACCCCGGTGGCGCGATGTTCCGCGGCCGGCTCGGCACGG CGTTCACCTTGCTGCTGGTGTTCGCCCTCGCCGACGCGCTGCGAAGAGCGGTGCGGCTGCGGCCCCTGGGCTGGTCGTGG TCCGACGTGGGTCGCCACCTGCGCGAGCGGTGGACGCCCCAGCGGGTGCTGCTCGTGTGCTCCGGGTTGCTCGCCTACCA CGTCGTCTACATCTCCTACCGCAACCTGAAGAGCTGGGACGCGTTCAACACCCCGCTGGACCAGGAACTCCTCGCGATCG AGCGATGGTTCCTGCTCGGCCACAGCCCGGCGGTGCTCCTCCACGGGCTGCTGGGGGAGGGCCAGGCCGCCGTGGTCCTC GCGGTCGTCTACCGGTCGTTCACCTACCTGGTGCCGCTGTCGGTGGTCGGCACCCTCGCGCTGCTGCCGCGGGTGCGCGA GGCCTACGTCATGCTGTGCTCCGCGCTGTGGGTGTGGATCCTGGGGGTCGGGTCGTACTACCTCGTCCCGTCCCTGGGCC CGTTCGCCTCGGCGCCCGAGGAGTTCGCCGGCCTGCGGCCGACCGCGATCAGCGCGACCCAGGTGAAGTACCTCGCCGAG CGCGCCCACTTCCTCGCCGATCCGCACGCGGGTGACGCCTTCGTGAGCATCTCGGCCTTCGCCAGCCTCCACGTCGGGTT CACCTGCACGGTGCTGCTGGTCGCCCGGTACTACCGGTGGCGACGTACGACGCTCGCGTTGGCCACCTTCCTGTCGGTCA CCATGGTCGCCACCGTGTACTTCGGCTGGCACTTCGTCGTCGACGACATCGCGGGGGTCGTGCTCGCCCTCGCAGCGTTC ACGCTCGGCCGGCTGATGGTCTACCCGGTCCGGAACGGGGATCGCTCGGTCGCGGACGGCTCCCACGCCGGTGAGGACGA CGTCGTGGCCTCGACATGA
Upstream 100 bases:
>100_bases GCGGCGACCGGCGTTCGATACGCTGCGGATGCCTGCCGCCCGGCAGTCCAGGTGGACCGTCGGTCTCGCGGGTGGGTGAG TCGTGAAGGCAGGTGGACGG
Downstream 100 bases:
>100_bases GCACGGTCGCCCGCTCCCTCGCCGCCGAGCCCGCCGACCTCGGCGGGGTCGCCGGCGGGTGGCAGCCCTCGCTCCGGCCG CCGCTGCGCCGCTGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MGAGISGREALRLTAWVWALTAVFASVALLRSEHLGIPFRDPGGAMFRGRLGTAFTLLLVFALADALRRAVRLRPLGWSW SDVGRHLRERWTPQRVLLVCSGLLAYHVVYISYRNLKSWDAFNTPLDQELLAIERWFLLGHSPAVLLHGLLGEGQAAVVL AVVYRSFTYLVPLSVVGTLALLPRVREAYVMLCSALWVWILGVGSYYLVPSLGPFASAPEEFAGLRPTAISATQVKYLAE RAHFLADPHAGDAFVSISAFASLHVGFTCTVLLVARYYRWRRTTLALATFLSVTMVATVYFGWHFVVDDIAGVVLALAAF TLGRLMVYPVRNGDRSVADGSHAGEDDVVAST
Sequences:
>Translated_352_residues MGAGISGREALRLTAWVWALTAVFASVALLRSEHLGIPFRDPGGAMFRGRLGTAFTLLLVFALADALRRAVRLRPLGWSW SDVGRHLRERWTPQRVLLVCSGLLAYHVVYISYRNLKSWDAFNTPLDQELLAIERWFLLGHSPAVLLHGLLGEGQAAVVL AVVYRSFTYLVPLSVVGTLALLPRVREAYVMLCSALWVWILGVGSYYLVPSLGPFASAPEEFAGLRPTAISATQVKYLAE RAHFLADPHAGDAFVSISAFASLHVGFTCTVLLVARYYRWRRTTLALATFLSVTMVATVYFGWHFVVDDIAGVVLALAAF TLGRLMVYPVRNGDRSVADGSHAGEDDVVAST >Mature_351_residues GAGISGREALRLTAWVWALTAVFASVALLRSEHLGIPFRDPGGAMFRGRLGTAFTLLLVFALADALRRAVRLRPLGWSWS DVGRHLRERWTPQRVLLVCSGLLAYHVVYISYRNLKSWDAFNTPLDQELLAIERWFLLGHSPAVLLHGLLGEGQAAVVLA VVYRSFTYLVPLSVVGTLALLPRVREAYVMLCSALWVWILGVGSYYLVPSLGPFASAPEEFAGLRPTAISATQVKYLAER AHFLADPHAGDAFVSISAFASLHVGFTCTVLLVARYYRWRRTTLALATFLSVTMVATVYFGWHFVVDDIAGVVLALAAFT LGRLMVYPVRNGDRSVADGSHAGEDDVVAST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38593; Mature: 38462
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGISGREALRLTAWVWALTAVFASVALLRSEHLGIPFRDPGGAMFRGRLGTAFTLLLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHH FALADALRRAVRLRPLGWSWSDVGRHLRERWTPQRVLLVCSGLLAYHVVYISYRNLKSWD HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC AFNTPLDQELLAIERWFLLGHSPAVLLHGLLGEGQAAVVLAVVYRSFTYLVPLSVVGTLA CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLPRVREAYVMLCSALWVWILGVGSYYLVPSLGPFASAPEEFAGLRPTAISATQVKYLAE HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH RAHFLADPHAGDAFVSISAFASLHVGFTCTVLLVARYYRWRRTTLALATFLSVTMVATVY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGWHFVVDDIAGVVLALAAFTLGRLMVYPVRNGDRSVADGSHAGEDDVVAST HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GAGISGREALRLTAWVWALTAVFASVALLRSEHLGIPFRDPGGAMFRGRLGTAFTLLLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHH FALADALRRAVRLRPLGWSWSDVGRHLRERWTPQRVLLVCSGLLAYHVVYISYRNLKSWD HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC AFNTPLDQELLAIERWFLLGHSPAVLLHGLLGEGQAAVVLAVVYRSFTYLVPLSVVGTLA CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLPRVREAYVMLCSALWVWILGVGSYYLVPSLGPFASAPEEFAGLRPTAISATQVKYLAE HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH RAHFLADPHAGDAFVSISAFASLHVGFTCTVLLVARYYRWRRTTLALATFLSVTMVATVY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGWHFVVDDIAGVVLALAAFTLGRLMVYPVRNGDRSVADGSHAGEDDVVAST HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA