| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is thrB [H]
Identifier: 119715981
GI number: 119715981
Start: 1856450
End: 1857352
Strand: Direct
Name: thrB [H]
Synonym: Noca_1746
Alternate gene names: 119715981
Gene position: 1856450-1857352 (Clockwise)
Preceding gene: 119715980
Following gene: 119715982
Centisome position: 37.23
GC content: 76.08
Gene sequence:
>903_bases GTGGTCACCTTCGTCGACGGGCCGGTCCGGGTGTCGGTCCCGGCCACCTCCGCGAACCTCGGGCCGGGCTTCGACTCGCT CGGCCTGGCCCTGTCGATGCGCGACGAGATCGAGGCCGAGGTGCTCGGCGCGGGTCTCGAGGTCCGGGTGTCGGGCTCGG GGTCCGACGAGGTGCCGCTCGACGAGACGCACCTGGTCGTGCGCTCGATGCACGCGGCCTTCGACCTGCTCGGCCGGCGC CCACCGGGGCTGCGGTTGACGTGCCGCAACGCGATCCCGCACGGCCGCGGCCTCGGGTCGTCCTCGGCGGCGATCGTGGG CGGTGTGGTCCTGGCCCGCGCCCTGGTCGCCGGGGGAGCCCTGCTGGTCGACGACGCGACCCTGTTCCGGATGGCCGCGC GGATCGAGGGCCATCCCGACAACGTCGCGCCCGCGTTCCACGGCGGGTTCGTGATCGCCGGCCGGGACGAGGGCACCGAC TTCTACGCCGTGTCCTCCCCGGTGGACCCGCGCATCGAGACCGTCGTCTTCGTGCCGCCGACCCCGGTCGCCACCGAGGT CGCCCGCGGCCTGCTGCCGGCGGCGGTGCCGCATGCCGACGCGGCCGCTGACGCCGGGCGTACGGCGCTGCTGGTCGCGG CGCTCGCCGGCCAGCCCGAGCACCTGTGGCTGGCCACCCGCGACTACCTCCACCAGGACTACCGCCGCCCCGCGATGCCG GAGTCACTGGCCCTGGTCGACGCGCTGCGGGCCGACGGCGTGCCGGCGACCGTGTCCGGCGCCGGTCCGACGGTGCTCGC GTTCACCGACGCCTCGGCGGCCGGTGCGCTGGCGGACCGTTGCCCCGCGGGCTGGGTGGCGCACCACCTCACCGTCGATC GCGACGGTGCCCGGTCCACCTGA
Upstream 100 bases:
>100_bases CGAGGGCTTCACCGAGAGCGGGAACAGCATCGTCGACACCGTGATCGACGCCGAGGTGACCGCCGCGGCGCAGGCCGCCG GTCTCGCGTAACGGGCCGGC
Downstream 100 bases:
>100_bases GGCTGCCTCGGCCGGCCGGCTCTCCTGACACTTCCGTGGGTACGGCGGGGTGTCCTGGCCACCGAACCGGCCCCGGGAAC GGTTGCTCACGCACCGCCGG
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MVTFVDGPVRVSVPATSANLGPGFDSLGLALSMRDEIEAEVLGAGLEVRVSGSGSDEVPLDETHLVVRSMHAAFDLLGRR PPGLRLTCRNAIPHGRGLGSSSAAIVGGVVLARALVAGGALLVDDATLFRMAARIEGHPDNVAPAFHGGFVIAGRDEGTD FYAVSSPVDPRIETVVFVPPTPVATEVARGLLPAAVPHADAAADAGRTALLVAALAGQPEHLWLATRDYLHQDYRRPAMP ESLALVDALRADGVPATVSGAGPTVLAFTDASAAGALADRCPAGWVAHHLTVDRDGARST
Sequences:
>Translated_300_residues MVTFVDGPVRVSVPATSANLGPGFDSLGLALSMRDEIEAEVLGAGLEVRVSGSGSDEVPLDETHLVVRSMHAAFDLLGRR PPGLRLTCRNAIPHGRGLGSSSAAIVGGVVLARALVAGGALLVDDATLFRMAARIEGHPDNVAPAFHGGFVIAGRDEGTD FYAVSSPVDPRIETVVFVPPTPVATEVARGLLPAAVPHADAAADAGRTALLVAALAGQPEHLWLATRDYLHQDYRRPAMP ESLALVDALRADGVPATVSGAGPTVLAFTDASAAGALADRCPAGWVAHHLTVDRDGARST >Mature_300_residues MVTFVDGPVRVSVPATSANLGPGFDSLGLALSMRDEIEAEVLGAGLEVRVSGSGSDEVPLDETHLVVRSMHAAFDLLGRR PPGLRLTCRNAIPHGRGLGSSSAAIVGGVVLARALVAGGALLVDDATLFRMAARIEGHPDNVAPAFHGGFVIAGRDEGTD FYAVSSPVDPRIETVVFVPPTPVATEVARGLLPAAVPHADAAADAGRTALLVAALAGQPEHLWLATRDYLHQDYRRPAMP ESLALVDALRADGVPATVSGAGPTVLAFTDASAAGALADRCPAGWVAHHLTVDRDGARST
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=306, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321814, Length=315, Percent_Identity=28.8888888888889, Blast_Score=112, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 30839; Mature: 30839
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTFVDGPVRVSVPATSANLGPGFDSLGLALSMRDEIEAEVLGAGLEVRVSGSGSDEVPL CEEEECCCEEEEECCCCCCCCCCCHHHCEEEEEHHHHHHHHCCCCEEEEECCCCCCCCCC DETHLVVRSMHAAFDLLGRRPPGLRLTCRNAIPHGRGLGSSSAAIVGGVVLARALVAGGA CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCE LLVDDATLFRMAARIEGHPDNVAPAFHGGFVIAGRDEGTDFYAVSSPVDPRIETVVFVPP EEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECC TPVATEVARGLLPAAVPHADAAADAGRTALLVAALAGQPEHLWLATRDYLHQDYRRPAMP CCHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCCCC ESLALVDALRADGVPATVSGAGPTVLAFTDASAAGALADRCPAGWVAHHLTVDRDGARST HHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MVTFVDGPVRVSVPATSANLGPGFDSLGLALSMRDEIEAEVLGAGLEVRVSGSGSDEVPL CEEEECCCEEEEECCCCCCCCCCCHHHCEEEEEHHHHHHHHCCCCEEEEECCCCCCCCCC DETHLVVRSMHAAFDLLGRRPPGLRLTCRNAIPHGRGLGSSSAAIVGGVVLARALVAGGA CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCE LLVDDATLFRMAARIEGHPDNVAPAFHGGFVIAGRDEGTDFYAVSSPVDPRIETVVFVPP EEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECC TPVATEVARGLLPAAVPHADAAADAGRTALLVAALAGQPEHLWLATRDYLHQDYRRPAMP CCHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCCCC ESLALVDALRADGVPATVSGAGPTVLAFTDASAAGALADRCPAGWVAHHLTVDRDGARST HHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]