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The map label for this gene is 119715957

Identifier: 119715957

GI number: 119715957

Start: 1832411

End: 1833025

Strand: Reverse

Name: 119715957

Synonym: Noca_1722

Alternate gene names: NA

Gene position: 1833025-1832411 (Counterclockwise)

Preceding gene: 119715960

Following gene: 119715954

Centisome position: 36.76

GC content: 67.15

Gene sequence:

>615_bases
ATGTACCCGCCGAAGACGGTCATCGAGATCGCCCGCAAGGCCGCGGGTCTGTCGCAGGCGCAGCTGGCGATGAAGGCGGG
CACCGCGCAATCGTCGGTCTCGGAGTACGAGTCCCGCCGCAAGTCGCCGACCTTGGAGGTGGTGGAGCGGCTCCTGGAGT
CCGCCGACGCCGAGCTCACGATCAAGCCGATCATCGACTTCGACACTCGGCAGGACCCCGAGATCGGCCGGTACGTCGTG
CCCGAAAAGCTCTGGTCGGTGCCGATGCCGGACTGCTTCAGCAAGATCCAGGTTCTGGGATACCTCGCCAAGTCCCGCCG
ACCGCTCGTCTGGGACCTGTCGAACGAGGCCGAGCGCATCGACTACTACGCGTGGGTCATCGGGCTCGGCGCCATCGATC
TGATGCTCGACTCCGTCGACGGGATCTTGTTGATGCAGGTTTGGGAGCGGCTGAACCTTCCGAGCGTGATCCGGGCAGCG
TGGCAGCCTGTCGTCGACGCGGCCACCGCCCCCCAGGACAAACAGCCCCGCGACCCTGCCGGATTCAGCGCGTGGCTCGC
AGGCGAGATCGGCGTCGAGTGGCGACCGGTCCGCCGGCGCAAGCCGCGTCAGTGA

Upstream 100 bases:

>100_bases
ATGGTGTGCTCCTCGCTGGTCGATGAGGCCAAGCGGTTCTCGACCTCACCCAGTAGGTGTGCAGGCCCTCCCAATCGATG
ATCAGCGATATCCTGCGGCC

Downstream 100 bases:

>100_bases
GTCACTGGCGGGTCTCACAGGCCGATCCCGCTGCCGGAGGACGGGACGGGTCGTGGCGGTTCCTCGACGGGCCCTTGCGC
CGGCCTCCGGCGCTGCTGGC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MYPPKTVIEIARKAAGLSQAQLAMKAGTAQSSVSEYESRRKSPTLEVVERLLESADAELTIKPIIDFDTRQDPEIGRYVV
PEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYAWVIGLGAIDLMLDSVDGILLMQVWERLNLPSVIRAA
WQPVVDAATAPQDKQPRDPAGFSAWLAGEIGVEWRPVRRRKPRQ

Sequences:

>Translated_204_residues
MYPPKTVIEIARKAAGLSQAQLAMKAGTAQSSVSEYESRRKSPTLEVVERLLESADAELTIKPIIDFDTRQDPEIGRYVV
PEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYAWVIGLGAIDLMLDSVDGILLMQVWERLNLPSVIRAA
WQPVVDAATAPQDKQPRDPAGFSAWLAGEIGVEWRPVRRRKPRQ
>Mature_204_residues
MYPPKTVIEIARKAAGLSQAQLAMKAGTAQSSVSEYESRRKSPTLEVVERLLESADAELTIKPIIDFDTRQDPEIGRYVV
PEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERIDYYAWVIGLGAIDLMLDSVDGILLMQVWERLNLPSVIRAA
WQPVVDAATAPQDKQPRDPAGFSAWLAGEIGVEWRPVRRRKPRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23001; Mature: 23001

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPPKTVIEIARKAAGLSQAQLAMKAGTAQSSVSEYESRRKSPTLEVVERLLESADAELT
CCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEE
IKPIIDFDTRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERI
EEEEECCCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
DYYAWVIGLGAIDLMLDSVDGILLMQVWERLNLPSVIRAAWQPVVDAATAPQDKQPRDPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GFSAWLAGEIGVEWRPVRRRKPRQ
CCHHHHHHCCCCCEECCCCCCCCC
>Mature Secondary Structure
MYPPKTVIEIARKAAGLSQAQLAMKAGTAQSSVSEYESRRKSPTLEVVERLLESADAELT
CCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEE
IKPIIDFDTRQDPEIGRYVVPEKLWSVPMPDCFSKIQVLGYLAKSRRPLVWDLSNEAERI
EEEEECCCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
DYYAWVIGLGAIDLMLDSVDGILLMQVWERLNLPSVIRAAWQPVVDAATAPQDKQPRDPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GFSAWLAGEIGVEWRPVRRRKPRQ
CCHHHHHHCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA