Click here to switch to the map view.

The map label for this gene is 119715948

Identifier: 119715948

GI number: 119715948

Start: 1817934

End: 1818185

Strand: Reverse

Name: 119715948

Synonym: Noca_1713

Alternate gene names: NA

Gene position: 1818185-1817934 (Counterclockwise)

Preceding gene: 119715950

Following gene: 119715946

Centisome position: 36.47

GC content: 69.05

Gene sequence:

>252_bases
ATGGATTGGCGCCACCGTTCGGCTTGCCTCGACGAGGACCCTGAGCTGTTCTTCCCGATCGGCAACACCGGTCCGGCCAT
CCTCCAGATCGAGGAGGCCAAGCAGGTGTGTCGTCGATGTGAGGTGCGCGAGCAGTGTCTGGCGTGGGCGCTCGAGGCCG
GGCAGGACCACGGCGTGTGGGGCGGTCTCAGCGAGGACGAGCGGCGCGCTCTGAAGCGCCGCAACGCACGAGCGCGGGTC
CGCACGGCCTGA

Upstream 100 bases:

>100_bases
TCGTGAATGCGTTCACTTCGCTGTGCCCGATCACGGCACCGCAGGTCTTGTCTGCCCCTGACCTGCACGATGACTTGTAG
GAAAGAGGGATCTCCCAGCC

Downstream 100 bases:

>100_bases
CCGGAGACGCGTCGGCGGATCCGCTGACGGTGGTCGAGCGAGGCGCGGCTAGATGAACTTGGTCATCTAGTCCAGCGGGA
TGTCCAGGGCGGCCCGCGTG

Product: transcription factor WhiB

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; Regulatory Protein; WhiB Family Transcription Factor; Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcription Factor WhiB Family; WhiB Family Regulatory Protein; Transcription Factor; WhiB Family Cell Cycle Control Transcriptional Regulator; Transcriptional Regulator WhiB; WhiB-Type Transcription Regulator; Transcription Regulatory Protein; WhiB Transcriptional Regulator; WhiB Family Transcription Regulator

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MDWRHRSACLDEDPELFFPIGNTGPAILQIEEAKQVCRRCEVREQCLAWALEAGQDHGVWGGLSEDERRALKRRNARARV
RTA

Sequences:

>Translated_83_residues
MDWRHRSACLDEDPELFFPIGNTGPAILQIEEAKQVCRRCEVREQCLAWALEAGQDHGVWGGLSEDERRALKRRNARARV
RTA
>Mature_83_residues
MDWRHRSACLDEDPELFFPIGNTGPAILQIEEAKQVCRRCEVREQCLAWALEAGQDHGVWGGLSEDERRALKRRNARARV
RTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9547; Mature: 9547

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRHRSACLDEDPELFFPIGNTGPAILQIEEAKQVCRRCEVREQCLAWALEAGQDHGVW
CCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGLSEDERRALKRRNARARVRTA
CCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDWRHRSACLDEDPELFFPIGNTGPAILQIEEAKQVCRRCEVREQCLAWALEAGQDHGVW
CCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGLSEDERRALKRRNARARVRTA
CCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA