| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715942
Identifier: 119715942
GI number: 119715942
Start: 1812314
End: 1812592
Strand: Direct
Name: 119715942
Synonym: Noca_1707
Alternate gene names: NA
Gene position: 1812314-1812592 (Clockwise)
Preceding gene: 119715941
Following gene: 119715947
Centisome position: 36.35
GC content: 68.82
Gene sequence:
>279_bases ATGAGCCACGACCACCGCCCAGAACCCAGCTCCGAGGACTGTGCGGACTTCCTCGAGCGGATCGTGTACTTCCTGGACAA CGAGCTCGACGAGGGCGACTGCTCCGCCGTGCGACTGCACCTGGACAGCTGCAACCCCTGCCTGGAGCGCTACGACCTCC AGCGCACGGTGAAGGCCGTGGTGGCGCGCTCGTGCGCGGAGTCGGCCCCCGACGAGCTGCGCAAGCGGGTGCTGCTGCGG ATCCGCGAGGTGCAGGTCCAGATCCGCGAGACGCCCTAG
Upstream 100 bases:
>100_bases TGTCCCGGCTGCACCGGGGCCGGCGCCAGCTGCGCGACATGCTCTCCGACTACGTCCGCGACAACGACCTGCTCACCGTC GGACGGGATGGCGGCACGTC
Downstream 100 bases:
>100_bases CGAGGACGCGGCAGCGGACTCGCCGATGGTGGTCGAGCACGCCGCGCGGCTGAGGGACGAAGCCGCGACCGGCAGGTCGA GACCGAGCCACGACGGCCGG
Product: anti-sigma factor
Products: NA
Alternate protein names: Anti-Sigma Factor Family Protein
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSHDHRPEPSSEDCADFLERIVYFLDNELDEGDCSAVRLHLDSCNPCLERYDLQRTVKAVVARSCAESAPDELRKRVLLR IREVQVQIRETP
Sequences:
>Translated_92_residues MSHDHRPEPSSEDCADFLERIVYFLDNELDEGDCSAVRLHLDSCNPCLERYDLQRTVKAVVARSCAESAPDELRKRVLLR IREVQVQIRETP >Mature_91_residues SHDHRPEPSSEDCADFLERIVYFLDNELDEGDCSAVRLHLDSCNPCLERYDLQRTVKAVVARSCAESAPDELRKRVLLRI REVQVQIRETP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10656; Mature: 10525
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDHRPEPSSEDCADFLERIVYFLDNELDEGDCSAVRLHLDSCNPCLERYDLQRTVKAV CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH VARSCAESAPDELRKRVLLRIREVQVQIRETP HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SHDHRPEPSSEDCADFLERIVYFLDNELDEGDCSAVRLHLDSCNPCLERYDLQRTVKAV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH VARSCAESAPDELRKRVLLRIREVQVQIRETP HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA