| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715940
Identifier: 119715940
GI number: 119715940
Start: 1810939
End: 1811601
Strand: Direct
Name: 119715940
Synonym: Noca_1705
Alternate gene names: NA
Gene position: 1810939-1811601 (Clockwise)
Preceding gene: 119715939
Following gene: 119715941
Centisome position: 36.32
GC content: 76.92
Gene sequence:
>663_bases GTGAGCACCGCAGAGCGCCGCGTCGACACCCCGCACGGCGAGGCGCGCCTGGTGGTCGACCAGGCGCGCGCTCCGGTCGC CACCGTCCTGCTCTCGCACGGCGCCGGCGCCGGGATCGACACGGCCGACCTGGAGGCCCTGGCGCGACACCTGCCGCGCA ACGGGATCACCGTGGTCCGCCTCGAGCAGCCCTGGAAGGTCGCCGGCCGCAAGGTCGCCACCGCGCCTGCCACGCTGGAC GCGGCCCTGGTGGCCGCTGCCAACCGGCTCCGCACCCGGACGCCGCTGGTCCTGGGCGGCCGGTCCGCCGGCGCCCGGTC GGCCCTGCGCTGCGCCCGACAGCTCGCGGCCAGCGGCTGCCTGGCGCTCTCGTTCCCGCTGCACCCGCCCGGCCACCCGG AGAAGACCCGGCTCGACGAGCTCCGCGGAGCCGGCGTACCGACCCTGGTGATCCAGGGCGAGCGTGACCCGATGGGCCGA CCCGAGGAGTTCCCCGACGGCGTGGACCTGTGCGTGGTCCCCGGTGCCGACCACGGCCTGAAGGTCCCGGCGCGCGGGCC GATCGCCCAGTCCGAGGCCCTCGAGATCGTCGTCGAGTCCGCACTGGAGTGGATCGTGCGCGAGGTCGCCGGCGGCGGCC GGGGGAATGACGGCCCGGCCTGA
Upstream 100 bases:
>100_bases TCGAGGCGTATCCCGTCGCCGCCCTGGTCAGCAACGTCCGCAACAACGGACCGGAGCTGGTCGAGCCGCTGCCGCTGGCG CCGGACGGCAAGGTCGTCTC
Downstream 100 bases:
>100_bases CGCGTTCACCTCGCATGCTCGCTGTGCTCGAACCGCCCGCCCCGGGGCTAGTCTGGGGTGCGATGACTGACCCCGACGTG ACCCTGCCCGAGACCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSTAERRVDTPHGEARLVVDQARAPVATVLLSHGAGAGIDTADLEALARHLPRNGITVVRLEQPWKVAGRKVATAPATLD AALVAAANRLRTRTPLVLGGRSAGARSALRCARQLAASGCLALSFPLHPPGHPEKTRLDELRGAGVPTLVIQGERDPMGR PEEFPDGVDLCVVPGADHGLKVPARGPIAQSEALEIVVESALEWIVREVAGGGRGNDGPA
Sequences:
>Translated_220_residues MSTAERRVDTPHGEARLVVDQARAPVATVLLSHGAGAGIDTADLEALARHLPRNGITVVRLEQPWKVAGRKVATAPATLD AALVAAANRLRTRTPLVLGGRSAGARSALRCARQLAASGCLALSFPLHPPGHPEKTRLDELRGAGVPTLVIQGERDPMGR PEEFPDGVDLCVVPGADHGLKVPARGPIAQSEALEIVVESALEWIVREVAGGGRGNDGPA >Mature_219_residues STAERRVDTPHGEARLVVDQARAPVATVLLSHGAGAGIDTADLEALARHLPRNGITVVRLEQPWKVAGRKVATAPATLDA ALVAAANRLRTRTPLVLGGRSAGARSALRCARQLAASGCLALSFPLHPPGHPEKTRLDELRGAGVPTLVIQGERDPMGRP EEFPDGVDLCVVPGADHGLKVPARGPIAQSEALEIVVESALEWIVREVAGGGRGNDGPA
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22904; Mature: 22773
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAERRVDTPHGEARLVVDQARAPVATVLLSHGAGAGIDTADLEALARHLPRNGITVVR CCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEE LEQPWKVAGRKVATAPATLDAALVAAANRLRTRTPLVLGGRSAGARSALRCARQLAASGC ECCCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCC LALSFPLHPPGHPEKTRLDELRGAGVPTLVIQGERDPMGRPEEFPDGVDLCVVPGADHGL EEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCE KVPARGPIAQSEALEIVVESALEWIVREVAGGGRGNDGPA ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STAERRVDTPHGEARLVVDQARAPVATVLLSHGAGAGIDTADLEALARHLPRNGITVVR CCCHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEE LEQPWKVAGRKVATAPATLDAALVAAANRLRTRTPLVLGGRSAGARSALRCARQLAASGC ECCCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCC LALSFPLHPPGHPEKTRLDELRGAGVPTLVIQGERDPMGRPEEFPDGVDLCVVPGADHGL EEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCE KVPARGPIAQSEALEIVVESALEWIVREVAGGGRGNDGPA ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA