| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715921
Identifier: 119715921
GI number: 119715921
Start: 1793326
End: 1793736
Strand: Reverse
Name: 119715921
Synonym: Noca_1686
Alternate gene names: NA
Gene position: 1793736-1793326 (Counterclockwise)
Preceding gene: 119715922
Following gene: 119715920
Centisome position: 35.98
GC content: 69.59
Gene sequence:
>411_bases ATGTCCAAGCAGCTCATCCTCGCGCTCGGCGCGGGGGGTGCGGCCGCGGCGGCGGTGGTCGCCTCGGCGGCCTCCATCGG CACGGTCGACTCGACCGATCTCGGTGCCGGCACCACGGTCGTCGCATCCTGCGACAGCAGCATCGACGTCAGCTACACGA CGGCCTACAACGCCACGACGGGCGAGTACGACGTCTCGTCCGTGACGCTCGACCATGTCGCCGCTGCCTGCATCGGTCAG CGGGTCAAGATCGCTCTCAGCGACGGGACCAGCTCCTTGGCCGAGGCCGACGTCGCGGTCCCGGTCTACACGGGGCTCCT CGACGACCAGACGGCGGACTTCACCGTCAACGCTCCCGCTGCCGACGTCACCGAGGTCGCCGTCGTGATCAGCGGAACGA CGACGCCGTAG
Upstream 100 bases:
>100_bases CAGCATGCGCTCGCATGCCGCGCTGGGGTGGCGGTCTGATGGTGTGTGCACGCGCGTTCTCCTGTAGCGCCCTGGGAGGG GCAGACTAGGGAGTTCACAG
Downstream 100 bases:
>100_bases CCCGCTGTCCGGCAGCCGGTGGTCGAGCTCGATACCCGACCGAGACGGCGCAGGTCCTGGCCGCGCCGCCTCTTCAGCCT GCTCCGGTGGGGATTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSKQLILALGAGGAAAAAVVASAASIGTVDSTDLGAGTTVVASCDSSIDVSYTTAYNATTGEYDVSSVTLDHVAAACIGQ RVKIALSDGTSSLAEADVAVPVYTGLLDDQTADFTVNAPAADVTEVAVVISGTTTP
Sequences:
>Translated_136_residues MSKQLILALGAGGAAAAAVVASAASIGTVDSTDLGAGTTVVASCDSSIDVSYTTAYNATTGEYDVSSVTLDHVAAACIGQ RVKIALSDGTSSLAEADVAVPVYTGLLDDQTADFTVNAPAADVTEVAVVISGTTTP >Mature_135_residues SKQLILALGAGGAAAAAVVASAASIGTVDSTDLGAGTTVVASCDSSIDVSYTTAYNATTGEYDVSSVTLDHVAAACIGQR VKIALSDGTSSLAEADVAVPVYTGLLDDQTADFTVNAPAADVTEVAVVISGTTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13273; Mature: 13141
Theoretical pI: Translated: 3.57; Mature: 3.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQLILALGAGGAAAAAVVASAASIGTVDSTDLGAGTTVVASCDSSIDVSYTTAYNATT CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCC GEYDVSSVTLDHVAAACIGQRVKIALSDGTSSLAEADVAVPVYTGLLDDQTADFTVNAPA CCCCCCEEEHHHHHHHHCCCEEEEEEECCCCCHHHCCEEEEEEECCCCCCCCCEEEECCC ADVTEVAVVISGTTTP CCCEEEEEEEECCCCC >Mature Secondary Structure SKQLILALGAGGAAAAAVVASAASIGTVDSTDLGAGTTVVASCDSSIDVSYTTAYNATT CCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCC GEYDVSSVTLDHVAAACIGQRVKIALSDGTSSLAEADVAVPVYTGLLDDQTADFTVNAPA CCCCCCEEEHHHHHHHHCCCEEEEEEECCCCCHHHCCEEEEEEECCCCCCCCCEEEECCC ADVTEVAVVISGTTTP CCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA