| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715922
Identifier: 119715922
GI number: 119715922
Start: 1793938
End: 1794663
Strand: Reverse
Name: 119715922
Synonym: Noca_1687
Alternate gene names: NA
Gene position: 1794663-1793938 (Counterclockwise)
Preceding gene: 119715924
Following gene: 119715921
Centisome position: 35.99
GC content: 74.66
Gene sequence:
>726_bases GTGGCGGCGGTCGCGACCGGGCTGCTGGTGGTCGCGGTCGCGGCCGGCTGGCTGGGCCCGGACGTCGGCCGCGGGGACGA CTTCTGCGAGGCGGCCCGGGACGGCTGGGTCAAGCAGCCGTCGAACACCTTCTCCAACCTGGGGTTCCTCGTCGCGGGCC TGGGGATCGCGTGGCACGCCGGCCGGGTCCGGCTCCGCGGGCTGGCGACGCCGTACGCCTGCGTCGTGGTGATCCTCGGC CCGGCCAGCGCCGCGATGCACGCGACCCAGTCGGCTGCGGGGGGCGAGCTCGACCTGCTCAGCATGTACCTCGTCGCGTC CTTCGCGGCCGCGTACGCGCTGATGCGGCTGGCCGGCCAGGGCCCGCTGTTCCTGGCCCAGGTCTTCAGCCTGTCGATCG CGGGCTGCGAGCTGGTCGGCCTGTGGCCGCACGAGGTGCCGGTGGTGCGGTACGCCGGCAACCTGGCCTTCGCCGCGCTG CTGCTGACCGCGGTCGTGGTCGAGGTGGTGCTGTGGCGCCGGGCCCCGGCCCTCGGTGGCCCGCGGACCGACCTGCGCTG GGGCGCGGCCGCGCTGGGCGCCGTCGTGGTCGCCTTCGGGATCTGGAACCTCACAAAGACGCTGTGGTGCGACCCCGACT CCCTGCTCCAGGGCCACGCCGCCTGGCACCTGCTGGACGCGCTGGCGGCCTACCTGTTGTTCCGCCTCTGGGCCAGCGAA AGGTAA
Upstream 100 bases:
>100_bases GCGTCCAGGTCGACCGGCAGGTCCATGGCGACACACTAGGGCGGTGCACCCCCGGCCTCCGCGCTCCCGGAGCCTGCGTC CGCTCGCGCTGACGGCGGCC
Downstream 100 bases:
>100_bases AGATCGGGCCGGAGGTCTGGTCCAGCAGCCTAGACCGGTGTAGACCGTGACCTGTATCACACAGTCGTGACTCGGCGCGG CGAACCGGAGGGAGATAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MAAVATGLLVVAVAAGWLGPDVGRGDDFCEAARDGWVKQPSNTFSNLGFLVAGLGIAWHAGRVRLRGLATPYACVVVILG PASAAMHATQSAAGGELDLLSMYLVASFAAAYALMRLAGQGPLFLAQVFSLSIAGCELVGLWPHEVPVVRYAGNLAFAAL LLTAVVVEVVLWRRAPALGGPRTDLRWGAAALGAVVVAFGIWNLTKTLWCDPDSLLQGHAAWHLLDALAAYLLFRLWASE R
Sequences:
>Translated_241_residues MAAVATGLLVVAVAAGWLGPDVGRGDDFCEAARDGWVKQPSNTFSNLGFLVAGLGIAWHAGRVRLRGLATPYACVVVILG PASAAMHATQSAAGGELDLLSMYLVASFAAAYALMRLAGQGPLFLAQVFSLSIAGCELVGLWPHEVPVVRYAGNLAFAAL LLTAVVVEVVLWRRAPALGGPRTDLRWGAAALGAVVVAFGIWNLTKTLWCDPDSLLQGHAAWHLLDALAAYLLFRLWASE R >Mature_240_residues AAVATGLLVVAVAAGWLGPDVGRGDDFCEAARDGWVKQPSNTFSNLGFLVAGLGIAWHAGRVRLRGLATPYACVVVILGP ASAAMHATQSAAGGELDLLSMYLVASFAAAYALMRLAGQGPLFLAQVFSLSIAGCELVGLWPHEVPVVRYAGNLAFAALL LTAVVVEVVLWRRAPALGGPRTDLRWGAAALGAVVVAFGIWNLTKTLWCDPDSLLQGHAAWHLLDALAAYLLFRLWASER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25345; Mature: 25214
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVATGLLVVAVAAGWLGPDVGRGDDFCEAARDGWVKQPSNTFSNLGFLVAGLGIAWHA CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC GRVRLRGLATPYACVVVILGPASAAMHATQSAAGGELDLLSMYLVASFAAAYALMRLAGQ CCEEEEECCCHHHEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GPLFLAQVFSLSIAGCELVGLWPHEVPVVRYAGNLAFAALLLTAVVVEVVLWRRAPALGG CCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRTDLRWGAAALGAVVVAFGIWNLTKTLWCDPDSLLQGHAAWHLLDALAAYLLFRLWASE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC R C >Mature Secondary Structure AAVATGLLVVAVAAGWLGPDVGRGDDFCEAARDGWVKQPSNTFSNLGFLVAGLGIAWHA CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC GRVRLRGLATPYACVVVILGPASAAMHATQSAAGGELDLLSMYLVASFAAAYALMRLAGQ CCEEEEECCCHHHEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GPLFLAQVFSLSIAGCELVGLWPHEVPVVRYAGNLAFAALLLTAVVVEVVLWRRAPALGG CCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRTDLRWGAAALGAVVVAFGIWNLTKTLWCDPDSLLQGHAAWHLLDALAAYLLFRLWASE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA