| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715914
Identifier: 119715914
GI number: 119715914
Start: 1786828
End: 1787910
Strand: Direct
Name: 119715914
Synonym: Noca_1679
Alternate gene names: NA
Gene position: 1786828-1787910 (Clockwise)
Preceding gene: 119715912
Following gene: 119715915
Centisome position: 35.84
GC content: 76.82
Gene sequence:
>1083_bases GTGGTGAACCGTCGGCACGGCACCTCCGTGTGTGTGGGTGTGACCAGTCCTACGGACGCCGCTGCGGCCCGGTTCACCCC GACCCGCGCCGCCCGCGCCTTCTGGGTCGGCGGGCCCGGGCACGGCGAGCTCCGGCCGGTCGGGCCGCGTCGGCCCGCCG CCGGCGAGGTGCTGGTGCGCACGCTGCACTCCGGCGTGAGTCGTGGGACCGAGACGCTGGTGTTCCGCGGCCGGGTGCCC GCCGACCAGCGTGCGGCGATGCGCGCGCCCCACCAGGAGGGCGACTTCCCCGGGCCGGTGAAGTACGGCTACCTCAGCGT GGGCCGGGTCGAGGAGGGGCCCGCGGACCTCGTCGGCCGGACCGTCTTCTGCCTCCACCCCCACCAGACGGAGTACGTCG TCCCGGCGACCGCGGTCGTCCCGGTGCCGGACGGGGTGCCGGCCCGCCGCGCGGTGCTCGCCGGCACCGTCGAGACCGCG CTGAACGCGCTGTGGGACCTGGGGCCGCTGGTCGGGGACCGGATCGCGGTCGTGGGCGGCGGGATGGTGGGGTGCTGCGT GGCCCGGCTGGTCGCCCGGATCCCCGCCACCGAGGTCACGCTGGTCGACGTCGCCCCGGGGCGAGCCCGGGTCGCGGCCG CGCTGGGCGTCGGCTTCGCCGTACCCGACGAGGCGCCGGCTGCGCGGGACGCCGTCGTGCACTGCAGCGCCACCGCCGCG GGGTTGCAGCTCTCTCTCGACCTGCTCGCCGCGGAGGGCACCGTGCTCGACCTCAGCTGGTACGGCGACCAGCCGGTGCA GCTCTCGCTCGGCGGCGCGTTCCACTCCGGGCGGCTCGGCATCCGCGCCAGTCAGGTCGGAGCCGTGGCCGCGGCCCGCC GGGCCACCCGCACCCACGCCGACCGGCTGGCGCTCGCGCTGGAGCTGCTGCGCGACCCGGCGTTCGACGCGTTGCTGACC GGGGAGTCCGACTTCGAGGACCTGCCCGACGTGATGGCCCGGCTGGCCGACGGCCGCCTGGACGCGCTGTGTCACACGAT CCGCTACCCGGACGTCGAGGGGGACCCGCCGTGTACACCGTGA
Upstream 100 bases:
>100_bases CGACGAGCACCAGGCCCGGGCCGGTGGGCCCGATGACGGCGACGACGAGCGCGAGCAGCGCCCGGACCAGCGTGACGGCG TCCGCGGGTCGTCGGAGCCG
Downstream 100 bases:
>100_bases CGGTCCGCGACCACATGATGGTCGCGCACAGCTTCACCGGCGAGGTCTTCGGGCCGGCGCAGCGCCTGCACGGTGCGACC TACGTCGTCGACGCGGCGTT
Product: dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase; Alcohol Dehydrogenase; FAD Dependent Oxidoreductase
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MVNRRHGTSVCVGVTSPTDAAAARFTPTRAARAFWVGGPGHGELRPVGPRRPAAGEVLVRTLHSGVSRGTETLVFRGRVP ADQRAAMRAPHQEGDFPGPVKYGYLSVGRVEEGPADLVGRTVFCLHPHQTEYVVPATAVVPVPDGVPARRAVLAGTVETA LNALWDLGPLVGDRIAVVGGGMVGCCVARLVARIPATEVTLVDVAPGRARVAAALGVGFAVPDEAPAARDAVVHCSATAA GLQLSLDLLAAEGTVLDLSWYGDQPVQLSLGGAFHSGRLGIRASQVGAVAAARRATRTHADRLALALELLRDPAFDALLT GESDFEDLPDVMARLADGRLDALCHTIRYPDVEGDPPCTP
Sequences:
>Translated_360_residues MVNRRHGTSVCVGVTSPTDAAAARFTPTRAARAFWVGGPGHGELRPVGPRRPAAGEVLVRTLHSGVSRGTETLVFRGRVP ADQRAAMRAPHQEGDFPGPVKYGYLSVGRVEEGPADLVGRTVFCLHPHQTEYVVPATAVVPVPDGVPARRAVLAGTVETA LNALWDLGPLVGDRIAVVGGGMVGCCVARLVARIPATEVTLVDVAPGRARVAAALGVGFAVPDEAPAARDAVVHCSATAA GLQLSLDLLAAEGTVLDLSWYGDQPVQLSLGGAFHSGRLGIRASQVGAVAAARRATRTHADRLALALELLRDPAFDALLT GESDFEDLPDVMARLADGRLDALCHTIRYPDVEGDPPCTP >Mature_360_residues MVNRRHGTSVCVGVTSPTDAAAARFTPTRAARAFWVGGPGHGELRPVGPRRPAAGEVLVRTLHSGVSRGTETLVFRGRVP ADQRAAMRAPHQEGDFPGPVKYGYLSVGRVEEGPADLVGRTVFCLHPHQTEYVVPATAVVPVPDGVPARRAVLAGTVETA LNALWDLGPLVGDRIAVVGGGMVGCCVARLVARIPATEVTLVDVAPGRARVAAALGVGFAVPDEAPAARDAVVHCSATAA GLQLSLDLLAAEGTVLDLSWYGDQPVQLSLGGAFHSGRLGIRASQVGAVAAARRATRTHADRLALALELLRDPAFDALLT GESDFEDLPDVMARLADGRLDALCHTIRYPDVEGDPPCTP
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37494; Mature: 37494
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNRRHGTSVCVGVTSPTDAAAARFTPTRAARAFWVGGPGHGELRPVGPRRPAAGEVLVR CCCCCCCCEEEEEECCCCCHHHHCCCCCHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHH TLHSGVSRGTETLVFRGRVPADQRAAMRAPHQEGDFPGPVKYGYLSVGRVEEGPADLVGR HHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCEECEEEECCCCCCCHHHHCC TVFCLHPHQTEYVVPATAVVPVPDGVPARRAVLAGTVETALNALWDLGPLVGDRIAVVGG EEEEECCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC GMVGCCVARLVARIPATEVTLVDVAPGRARVAAALGVGFAVPDEAPAARDAVVHCSATAA CHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCEECCCCCCCCCCEEEEECCCCC GLQLSLDLLAAEGTVLDLSWYGDQPVQLSLGGAFHSGRLGIRASQVGAVAAARRATRTHA CEEEEEEEEECCCCEEEEEECCCCCEEEEECCCEECCCCCEEHHHHHHHHHHHHHHHHHH DRLALALELLRDPAFDALLTGESDFEDLPDVMARLADGRLDALCHTIRYPDVEGDPPCTP HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVNRRHGTSVCVGVTSPTDAAAARFTPTRAARAFWVGGPGHGELRPVGPRRPAAGEVLVR CCCCCCCCEEEEEECCCCCHHHHCCCCCHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHH TLHSGVSRGTETLVFRGRVPADQRAAMRAPHQEGDFPGPVKYGYLSVGRVEEGPADLVGR HHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCEECEEEECCCCCCCHHHHCC TVFCLHPHQTEYVVPATAVVPVPDGVPARRAVLAGTVETALNALWDLGPLVGDRIAVVGG EEEEECCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC GMVGCCVARLVARIPATEVTLVDVAPGRARVAAALGVGFAVPDEAPAARDAVVHCSATAA CHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCEECCCCCCCCCCEEEEECCCCC GLQLSLDLLAAEGTVLDLSWYGDQPVQLSLGGAFHSGRLGIRASQVGAVAAARRATRTHA CEEEEEEEEECCCCEEEEEECCCCCEEEEECCCEECCCCCEEHHHHHHHHHHHHHHHHHH DRLALALELLRDPAFDALLTGESDFEDLPDVMARLADGRLDALCHTIRYPDVEGDPPCTP HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA