| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715915
Identifier: 119715915
GI number: 119715915
Start: 1787907
End: 1788278
Strand: Direct
Name: 119715915
Synonym: Noca_1680
Alternate gene names: NA
Gene position: 1787907-1788278 (Clockwise)
Preceding gene: 119715914
Following gene: 119715916
Centisome position: 35.86
GC content: 73.39
Gene sequence:
>372_bases GTGACGGTCCGCGACCACATGATGGTCGCGCACAGCTTCACCGGCGAGGTCTTCGGGCCGGCGCAGCGCCTGCACGGTGC GACCTACGTCGTCGACGCGGCGTTCTCCGGGCCGGAGCTCGGGCCGGACGGGATCCTCCTCGACATCGGCCGCGCGGCCG AGCTGCTCCGCGAGGTCCTCGGCGGGCTCACCTACCGCAACCTCGACGACGAGGCCGACTTCGCGGGCGTCAACACCTCG ACCGAGCTGCTCGCGCGGACGGTCGCCGACCGGCTGGCGGAGCGGACCCCAGGGCTCGGCCCGGTGACGGGCCTCCTGGT CACCCTGCACGAGTCGCACATCGCCTCGGCCAGCTTCGCGAGGCCGGTGTGA
Upstream 100 bases:
>100_bases ACCTGCCCGACGTGATGGCCCGGCTGGCCGACGGCCGCCTGGACGCGCTGTGTCACACGATCCGCTACCCGGACGTCGAG GGGGACCCGCCGTGTACACC
Downstream 100 bases:
>100_bases CCGTCCACCTGGTGCTGCCCGCAGGCGTCGACGACCCGGCCCGGCCGAGCGGCGGGAACGTCTACGACCGCCGGGTCTCC GACGGCCTCGGCGCGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Queuosine Biosynthesis Protein QueD; 6-Pyruvoyltetrahydropterin Synthase
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTVRDHMMVAHSFTGEVFGPAQRLHGATYVVDAAFSGPELGPDGILLDIGRAAELLREVLGGLTYRNLDDEADFAGVNTS TELLARTVADRLAERTPGLGPVTGLLVTLHESHIASASFARPV
Sequences:
>Translated_123_residues MTVRDHMMVAHSFTGEVFGPAQRLHGATYVVDAAFSGPELGPDGILLDIGRAAELLREVLGGLTYRNLDDEADFAGVNTS TELLARTVADRLAERTPGLGPVTGLLVTLHESHIASASFARPV >Mature_122_residues TVRDHMMVAHSFTGEVFGPAQRLHGATYVVDAAFSGPELGPDGILLDIGRAAELLREVLGGLTYRNLDDEADFAGVNTST ELLARTVADRLAERTPGLGPVTGLLVTLHESHIASASFARPV
Specific function: Unknown
COG id: COG0720
COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13040; Mature: 12909
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRDHMMVAHSFTGEVFGPAQRLHGATYVVDAAFSGPELGPDGILLDIGRAAELLREVL CCCCHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHH GGLTYRNLDDEADFAGVNTSTELLARTVADRLAERTPGLGPVTGLLVTLHESHIASASFA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC RPV CCC >Mature Secondary Structure TVRDHMMVAHSFTGEVFGPAQRLHGATYVVDAAFSGPELGPDGILLDIGRAAELLREVL CCCHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHH GGLTYRNLDDEADFAGVNTSTELLARTVADRLAERTPGLGPVTGLLVTLHESHIASASFA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC RPV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA