| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hetM [H]
Identifier: 119715902
GI number: 119715902
Start: 1771554
End: 1772630
Strand: Direct
Name: hetM [H]
Synonym: Noca_1667
Alternate gene names: 119715902
Gene position: 1771554-1772630 (Clockwise)
Preceding gene: 119715901
Following gene: 119715903
Centisome position: 35.53
GC content: 72.98
Gene sequence:
>1077_bases ATGACCGGGTTCCCCGGCTTCCTCGGATCGGCCCTGCTCGGGCGCCTGCTGGCCCGGCGGGAGGGGGTCCGGGCGATCTG CCTGGTCCAGCCCCGGCACCTTGCGGAGGCGCGCACCAGGCTCGCCAGGATCGAGGCCGACCAGCCCCACGTCGCCGGCC GCGTCGAGCTGGTCGAGGGCGACCTCACCGCGCCGGGCCTCGACGTCGCACCCGCCGCGCACGCCGGTCTGGCCGAGGTC ACCGAGGTGTGGCACCTGGCCGCCGTCTACGACCTCACGGTGCCGGAGGCGGTCGCCCGACGGGTCAACGTCGAGGGCAC CGAACGGATCCTCGAGTTCTGCCGCACCCGCGCGCGCCTCGACCGGCTGCAGTACGTCAGCACCTGCTACGTCAGCGGCC GTCACCCCGGCCGCTTCTCCGAGGACGACCTCGACACCGGGCAGGAGTTCCGCAACCACTACGAGTCCACGAAGTTCGAG GCCGAGCTCCTCGTCCGCCGGGCGATGGCCGACGGTCTGCCGGCCACGGTCTACCGGCCCGGCATCGTCGTCGGTGACTC GCGCACCGGGGCGACGCAGAAGTACGACGGCCCCTACTTCCTCGCGACCTTCCTGCGGCGGCAGCCACGGTGGGCCGCGG TGGTGCCCGCGGTCGGGGACGCCGACAGCGTGCGGTTCTGCCTGGTGCCGCGAGACTTCGTCATCGACGCCATGGACGCG CTCTCGGTGCTCGACCGCTCGGTGGGTCGCACCTATGCGCTGACCGACCCGCACCCGCCGACGGTCCGCGAGCTGGTGAC CACGTTCGCGCGCCACCTGGGACGCCGGGTCGTGTGGCTGCGGCTGCCGCTCGGCCCGACCCGCGCCCTGGTGGGGCTCC CCGGAGTCGAGCGCCTGCTCGGCATCCCCGCCGAGTCGCTGGACTACTTCGCGTCGCCGACGAGCTACGACACCTCGCAC ACCTCCGCGAACCTCGAGGGGACCGGTGTGGTGTGCCCGTCCTTCGACTCCTACGCGGGCCGGCTCCTCGACTACATGGT CGAGCACCCGGAGATCAACGCCGCGGCGATGGTCTGA
Upstream 100 bases:
>100_bases GGCGTGACCCGAGGCGGCCAAAGGTCCCGAAGGTGCAGCCGTTCGCCTCGGGCGCCCGCCCACCGCTGAAGCTACCGTCC GGTACGTGACGGCTCTGCTG
Downstream 100 bases:
>100_bases GGGTGAGCGCGATGCCGAGGACCGAGCTGCCACTGGTCGTGAACGTCAGCCTCGCCGGCCGTGAGCGTGACTACGACGAG ACCGTCACCTTCCTGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTGFPGFLGSALLGRLLARREGVRAICLVQPRHLAEARTRLARIEADQPHVAGRVELVEGDLTAPGLDVAPAAHAGLAEV TEVWHLAAVYDLTVPEAVARRVNVEGTERILEFCRTRARLDRLQYVSTCYVSGRHPGRFSEDDLDTGQEFRNHYESTKFE AELLVRRAMADGLPATVYRPGIVVGDSRTGATQKYDGPYFLATFLRRQPRWAAVVPAVGDADSVRFCLVPRDFVIDAMDA LSVLDRSVGRTYALTDPHPPTVRELVTTFARHLGRRVVWLRLPLGPTRALVGLPGVERLLGIPAESLDYFASPTSYDTSH TSANLEGTGVVCPSFDSYAGRLLDYMVEHPEINAAAMV
Sequences:
>Translated_358_residues MTGFPGFLGSALLGRLLARREGVRAICLVQPRHLAEARTRLARIEADQPHVAGRVELVEGDLTAPGLDVAPAAHAGLAEV TEVWHLAAVYDLTVPEAVARRVNVEGTERILEFCRTRARLDRLQYVSTCYVSGRHPGRFSEDDLDTGQEFRNHYESTKFE AELLVRRAMADGLPATVYRPGIVVGDSRTGATQKYDGPYFLATFLRRQPRWAAVVPAVGDADSVRFCLVPRDFVIDAMDA LSVLDRSVGRTYALTDPHPPTVRELVTTFARHLGRRVVWLRLPLGPTRALVGLPGVERLLGIPAESLDYFASPTSYDTSH TSANLEGTGVVCPSFDSYAGRLLDYMVEHPEINAAAMV >Mature_357_residues TGFPGFLGSALLGRLLARREGVRAICLVQPRHLAEARTRLARIEADQPHVAGRVELVEGDLTAPGLDVAPAAHAGLAEVT EVWHLAAVYDLTVPEAVARRVNVEGTERILEFCRTRARLDRLQYVSTCYVSGRHPGRFSEDDLDTGQEFRNHYESTKFEA ELLVRRAMADGLPATVYRPGIVVGDSRTGATQKYDGPYFLATFLRRQPRWAAVVPAVGDADSVRFCLVPRDFVIDAMDAL SVLDRSVGRTYALTDPHPPTVRELVTTFARHLGRRVVWLRLPLGPTRALVGLPGVERLLGIPAESLDYFASPTSYDTSHT SANLEGTGVVCPSFDSYAGRLLDYMVEHPEINAAAMV
Specific function: Unknown
COG id: COG3320
COG function: function code Q; Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Drosophila melanogaster, GI24639308, Length=276, Percent_Identity=28.2608695652174, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009081 - InterPro: IPR013120 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR010080 [H]
Pfam domain/function: PF07993 NAD_binding_4; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 39332; Mature: 39201
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFPGFLGSALLGRLLARREGVRAICLVQPRHLAEARTRLARIEADQPHVAGRVELVEG CCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DLTAPGLDVAPAAHAGLAEVTEVWHLAAVYDLTVPEAVARRVNVEGTERILEFCRTRARL CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH DRLQYVSTCYVSGRHPGRFSEDDLDTGQEFRNHYESTKFEAELLVRRAMADGLPATVYRP HHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECC GIVVGDSRTGATQKYDGPYFLATFLRRQPRWAAVVPAVGDADSVRFCLVPRDFVIDAMDA CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHH LSVLDRSVGRTYALTDPHPPTVRELVTTFARHLGRRVVWLRLPLGPTRALVGLPGVERLL HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCHHHHH GIPAESLDYFASPTSYDTSHTSANLEGTGVVCPSFDSYAGRLLDYMVEHPEINAAAMV CCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TGFPGFLGSALLGRLLARREGVRAICLVQPRHLAEARTRLARIEADQPHVAGRVELVEG CCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DLTAPGLDVAPAAHAGLAEVTEVWHLAAVYDLTVPEAVARRVNVEGTERILEFCRTRARL CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH DRLQYVSTCYVSGRHPGRFSEDDLDTGQEFRNHYESTKFEAELLVRRAMADGLPATVYRP HHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECC GIVVGDSRTGATQKYDGPYFLATFLRRQPRWAAVVPAVGDADSVRFCLVPRDFVIDAMDA CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHH LSVLDRSVGRTYALTDPHPPTVRELVTTFARHLGRRVVWLRLPLGPTRALVGLPGVERLL HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCHHHHH GIPAESLDYFASPTSYDTSHTSANLEGTGVVCPSFDSYAGRLLDYMVEHPEINAAAMV CCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157596; 11759840 [H]