Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715901

Identifier: 119715901

GI number: 119715901

Start: 1769814

End: 1771460

Strand: Direct

Name: 119715901

Synonym: Noca_1666

Alternate gene names: NA

Gene position: 1769814-1771460 (Clockwise)

Preceding gene: 119715900

Following gene: 119715902

Centisome position: 35.5

GC content: 74.92

Gene sequence:

>1647_bases
GTGAGCACCGTGTCCGCCCCTGCGCCGGTCGACCTGGCCGGCACCCGGCGCCTGGTCCGCCTGGCCGTGCGTCGCGACCG
GTACACGATCCCCGCCTGGTGGGCGGGGCTGGGCCTGTTCGTGGCGGCGACGACCGCGATGTTCACCGAGGATCTGGCCC
GCCAGGAGGACCTGCTGACCGAGACCGAGCTGGTGGCGACCAACGCAGGCATGCGTCTGATCGGGCTCACCTCCGGACCG
AGCGTCGGCGGTTACCTGCTGCACCGCGAGTTCGTGACGCTCGCCGTGCTCGCCGCGGTGATGAGCACCTTCGCCGTGAT
CCGGCACACCCGCCAGAACGAGGAGCTGGGCCGGGCCGAGATGCTCGGCTCGACCGTCGTCGGACGGCAGGCTGGCCTGG
CGGCCGGCGTCCTGGTCGCCCTGGCTGCCGACCTCGGCCTCGCGCTGGTGCTCGGCGCCGCCATCGCGGTCAACGGGCTG
TCGGTCGAGGGGGCGTTCCTGGCCGGTGCCTCCGTCGCCGCGGTCGGCATCGTCTGGGTCGGCCTCGCCGCGGTGACCTG
CCAGCTCTCCGCGACGACCCGCGGAGCCGCCGGGATCGCGATGGGCGCGCTCGGGGTCGCGTTCGTGCTCAGCGGCGTCG
GCAACATGATCGGGACCGTCGACGAGGCCGGGCTCCGGGTGGCCAGCGCCTGGCCGGCGTGGCTCTCGCCCATCGGGTGG
GGCCAGCAGACCCGGCCGTTCGCCGACGCCCTCTGGTGGCCGCTGCTGCTGGCCCTGGCGTTCGCCGGCCTGCTGCTCGT
GGTCGCCGTCGCGCTCGGCTCGCGCCGCGACGTCGGGCGCGGCCTCTGGGCGCAGCGCAGGGGCCCCGGGCACGCCCGGC
GGACCCTGCTGAGCCCCACCGGACTGGTCTGGCGGCTGCAGCGTGGGGTGTTCCTGGCATGGGGTGTGGCCCTCACCGTC
TTCGGGCTGATCTTCGGGAGCCTCACCGAACAGATCCAGGGGCTGGAGGGGGACGCCAAGGAGTGGTGGACGGAGATGGG
TGGCACCGCCGAGGTGGTCGCGGCCTACCAGGTGTCGATGATCCAGATGGCCGGCATGTTCGTGGCCATGTACGCGGTCC
AGGCGCTGTTGCGGATGCGGGTCGACGAGCTCGGCGGCACGCTCGAGCCGCTGCTGGCCGCCGGCGTCACCCGGATCCGC
TGGTGGTGGGCCCACCTCGTCACCGTGGTGGGCGGGTCGGCGGCGCTGATGGTGGGGTTCGCCGCCGGCATGGGGCTGGC
GACCGGCCAGGTCGTCGGGGACACCGGCGTCCAGGTGCGCGACCTCCTGTGGGCCGGCCTGGTCCAGCTCCCGGGCGTGG
TGGTCGTCGCCGCGGCGGTGGTCGCGATCGTCTGCCTGGTCCCGCGCTGGTCGGTCCCGGCCAGCTGGGCGCTGCTGCTC
GCGGCCCTCGTGGCCGGGCCGATGTTCGGGCCGGGGCTGAAGCTGCCGACGTGGGTGCAGGACCTCTCGCCGTTCACCCA
CAGCCCGCAGGCACCCGCCGTGCCGGTCGACGCCGTACCGCTGCTCGCTCTCGGCGGTGCCGCCGTCGCCCTCGCGGGCG
CCGCCCTGCTCGTCCTGCGACGCCGCGACCTGGCCCTGCCGGCGTGA

Upstream 100 bases:

>100_bases
ACGACGTCCGGTCGCTCACCAGCACCCCGCCCACGCTGGAGGAGCTGTTCCTCCGCCACTACGGCGACCGCCTCGATCGG
CCGACCGCCGTCGGGAGCCG

Downstream 100 bases:

>100_bases
CCCGAGGCGGCCAAAGGTCCCGAAGGTGCAGCCGTTCGCCTCGGGCGCCCGCCCACCGCTGAAGCTACCGTCCGGTACGT
GACGGCTCTGCTGATGACCG

Product: putative ABC antibiotics transporter

Products: NA

Alternate protein names: Exporter Of Polyketide Antibiotics; ABC Transporter Membrane-Spanning Protein; Anibiotic ABC Transporter Efflux Pump; ABC Transporter Membrane Protein; ABC Transporter; ABC Transporter Permease Protein; Exporter Of Polyketide Antibiotics- Like Protein; ABC Antibiotics Transporter; Abc Transporter Integral Membrane Subunit; Tetronasin Resistance Transmembrane Protein; ABC Transporter Transmembrane Subunit; TnrB3 Protein; ABC Transporter Permease; ABC Transporter Polyketide Tetronasin Permease; Tetronasin-Transport Membrane Protein ABC Transporter; ABC-2 Type Transport System Permease Protein; Amino Acid Permease

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSTVSAPAPVDLAGTRRLVRLAVRRDRYTIPAWWAGLGLFVAATTAMFTEDLARQEDLLTETELVATNAGMRLIGLTSGP
SVGGYLLHREFVTLAVLAAVMSTFAVIRHTRQNEELGRAEMLGSTVVGRQAGLAAGVLVALAADLGLALVLGAAIAVNGL
SVEGAFLAGASVAAVGIVWVGLAAVTCQLSATTRGAAGIAMGALGVAFVLSGVGNMIGTVDEAGLRVASAWPAWLSPIGW
GQQTRPFADALWWPLLLALAFAGLLLVVAVALGSRRDVGRGLWAQRRGPGHARRTLLSPTGLVWRLQRGVFLAWGVALTV
FGLIFGSLTEQIQGLEGDAKEWWTEMGGTAEVVAAYQVSMIQMAGMFVAMYAVQALLRMRVDELGGTLEPLLAAGVTRIR
WWWAHLVTVVGGSAALMVGFAAGMGLATGQVVGDTGVQVRDLLWAGLVQLPGVVVVAAAVVAIVCLVPRWSVPASWALLL
AALVAGPMFGPGLKLPTWVQDLSPFTHSPQAPAVPVDAVPLLALGGAAVALAGAALLVLRRRDLALPA

Sequences:

>Translated_548_residues
MSTVSAPAPVDLAGTRRLVRLAVRRDRYTIPAWWAGLGLFVAATTAMFTEDLARQEDLLTETELVATNAGMRLIGLTSGP
SVGGYLLHREFVTLAVLAAVMSTFAVIRHTRQNEELGRAEMLGSTVVGRQAGLAAGVLVALAADLGLALVLGAAIAVNGL
SVEGAFLAGASVAAVGIVWVGLAAVTCQLSATTRGAAGIAMGALGVAFVLSGVGNMIGTVDEAGLRVASAWPAWLSPIGW
GQQTRPFADALWWPLLLALAFAGLLLVVAVALGSRRDVGRGLWAQRRGPGHARRTLLSPTGLVWRLQRGVFLAWGVALTV
FGLIFGSLTEQIQGLEGDAKEWWTEMGGTAEVVAAYQVSMIQMAGMFVAMYAVQALLRMRVDELGGTLEPLLAAGVTRIR
WWWAHLVTVVGGSAALMVGFAAGMGLATGQVVGDTGVQVRDLLWAGLVQLPGVVVVAAAVVAIVCLVPRWSVPASWALLL
AALVAGPMFGPGLKLPTWVQDLSPFTHSPQAPAVPVDAVPLLALGGAAVALAGAALLVLRRRDLALPA
>Mature_547_residues
STVSAPAPVDLAGTRRLVRLAVRRDRYTIPAWWAGLGLFVAATTAMFTEDLARQEDLLTETELVATNAGMRLIGLTSGPS
VGGYLLHREFVTLAVLAAVMSTFAVIRHTRQNEELGRAEMLGSTVVGRQAGLAAGVLVALAADLGLALVLGAAIAVNGLS
VEGAFLAGASVAAVGIVWVGLAAVTCQLSATTRGAAGIAMGALGVAFVLSGVGNMIGTVDEAGLRVASAWPAWLSPIGWG
QQTRPFADALWWPLLLALAFAGLLLVVAVALGSRRDVGRGLWAQRRGPGHARRTLLSPTGLVWRLQRGVFLAWGVALTVF
GLIFGSLTEQIQGLEGDAKEWWTEMGGTAEVVAAYQVSMIQMAGMFVAMYAVQALLRMRVDELGGTLEPLLAAGVTRIRW
WWAHLVTVVGGSAALMVGFAAGMGLATGQVVGDTGVQVRDLLWAGLVQLPGVVVVAAAVVAIVCLVPRWSVPASWALLLA
ALVAGPMFGPGLKLPTWVQDLSPFTHSPQAPAVPVDAVPLLALGGAAVALAGAALLVLRRRDLALPA

Specific function: Unknown

COG id: COG3559

COG function: function code M; Putative exporter of polyketide antibiotics

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56840; Mature: 56708

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVSAPAPVDLAGTRRLVRLAVRRDRYTIPAWWAGLGLFVAATTAMFTEDLARQEDLLT
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETELVATNAGMRLIGLTSGPSVGGYLLHREFVTLAVLAAVMSTFAVIRHTRQNEELGRAE
HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MLGSTVVGRQAGLAAGVLVALAADLGLALVLGAAIAVNGLSVEGAFLAGASVAAVGIVWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHH
GLAAVTCQLSATTRGAAGIAMGALGVAFVLSGVGNMIGTVDEAGLRVASAWPAWLSPIGW
HHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEECCCCHHHHCCCCC
GQQTRPFADALWWPLLLALAFAGLLLVVAVALGSRRDVGRGLWAQRRGPGHARRTLLSPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCCCCCCHHHHHHCCCC
GLVWRLQRGVFLAWGVALTVFGLIFGSLTEQIQGLEGDAKEWWTEMGGTAEVVAAYQVSM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHH
IQMAGMFVAMYAVQALLRMRVDELGGTLEPLLAAGVTRIRWWWAHLVTVVGGSAALMVGF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAGMGLATGQVVGDTGVQVRDLLWAGLVQLPGVVVVAAAVVAIVCLVPRWSVPASWALLL
HHCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AALVAGPMFGPGLKLPTWVQDLSPFTHSPQAPAVPVDAVPLLALGGAAVALAGAALLVLR
HHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHH
RRDLALPA
HHHCCCCC
>Mature Secondary Structure 
STVSAPAPVDLAGTRRLVRLAVRRDRYTIPAWWAGLGLFVAATTAMFTEDLARQEDLLT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETELVATNAGMRLIGLTSGPSVGGYLLHREFVTLAVLAAVMSTFAVIRHTRQNEELGRAE
HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MLGSTVVGRQAGLAAGVLVALAADLGLALVLGAAIAVNGLSVEGAFLAGASVAAVGIVWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHH
GLAAVTCQLSATTRGAAGIAMGALGVAFVLSGVGNMIGTVDEAGLRVASAWPAWLSPIGW
HHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEECCCCHHHHCCCCC
GQQTRPFADALWWPLLLALAFAGLLLVVAVALGSRRDVGRGLWAQRRGPGHARRTLLSPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCCCCCCHHHHHHCCCC
GLVWRLQRGVFLAWGVALTVFGLIFGSLTEQIQGLEGDAKEWWTEMGGTAEVVAAYQVSM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHH
IQMAGMFVAMYAVQALLRMRVDELGGTLEPLLAAGVTRIRWWWAHLVTVVGGSAALMVGF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAGMGLATGQVVGDTGVQVRDLLWAGLVQLPGVVVVAAAVVAIVCLVPRWSVPASWALLL
HHCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AALVAGPMFGPGLKLPTWVQDLSPFTHSPQAPAVPVDAVPLLALGGAAVALAGAALLVLR
HHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHH
RRDLALPA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA