| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715814
Identifier: 119715814
GI number: 119715814
Start: 1671629
End: 1672627
Strand: Reverse
Name: 119715814
Synonym: Noca_1578
Alternate gene names: NA
Gene position: 1672627-1671629 (Counterclockwise)
Preceding gene: 119715815
Following gene: 119715788
Centisome position: 33.55
GC content: 64.36
Gene sequence:
>999_bases GTGACCAGTGTCGCCGTGCTCCGCGAGCAAATCGCCGAACTCGAAGCCTTGGCCGTTGAGACCGAAGCCAGTACGTCGTT CGCCACCCGCATGATGATGCGAAGCATCGACCAGATGCGCGACGACCTTGCCGAAGCGGTCGACCTGGCTCTTCGGCCCG AACTGAAGGTCGTGATCGAAGGGGTGCCGGTCAAGGGACACGAGATCCGGGTTGATGCCCTAAGCCGGCTGCTCTATAGC CTCCAGGAGGCGATCTCATCGGTCGCGCAGGCGCTGACAGGAAAGGCGACTGAGCGAGCCTCCCTGCCCGGCGTGATCCG TGACTCGACGTCGCTGCGTTTGGCGGCTGTCTTTCCTGGATCGTTTGGCGCCACGCTGCGCGGACCTGTGGACGCGAAGG TCGAGGCCATGATCGAGGCGGGACAAGACCCGCTCTTTCCCCAAGACGAGACCGAAACACTGCTCGACCAGGCCGTCGAC GTCGTGCTCGACGTGATCGACCTGGCCGGAGCAGAGGGAGTCGATGACGGACCGATCATCGAGGCCGTGCTCCCCCTGGG CGGTCGTGCGTTCAAGCATCTGAAGGACCTGTCCGACGCGATCGTGGACCGAGAGATGACGGCGAACCTCGACTGGACCC ACCTCGGCCAGGAGACCCGGCGCGCAACCGTCGACAAGCAATCTGCACGCCGCCTGAACGACGTCCTGACCATGAACCGA GTTACGGAGGCCACCGAGACGATTCACGGTCATCTCGGCACTGCCAGTGAGTTCCACGGTGGGCGCTTGGAGATCCAGCG AGACAACGGTGAAGTCATCAGCGCGAAGGTGGCAGACGATCTGGTGCCGCGGCTCGGAGAGTTCTACAGCCAGCGGGTCG CAGCGGATGCGATCGTCACGATCGCACGCTCGACGGCGACTGGTGCCGAGAGGAAGTCGTACGTCGTCACCGGCCTGTCG ACGCTGCCGGAGCCGCCACAGCTACCGGAGGCCGAGTAG
Upstream 100 bases:
>100_bases CGGACCGTACGGCGGCCCGCAAGGCCGAGGGCTACTGGCGGAGGATGTGGACGAATGTCAAGGGCAGCACCTTGACGAAG GGCTTCCTGGAGGTGGGCGC
Downstream 100 bases:
>100_bases CCGCGTCTGTCCTTGTACGCGAATGGCGGCGACGGACCTCCTCAGTTCGATCCCTCGTCCTGAAACCGTCGACCCCGCCG GCGGGTGGACTCGCTCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTSVAVLREQIAELEALAVETEASTSFATRMMMRSIDQMRDDLAEAVDLALRPELKVVIEGVPVKGHEIRVDALSRLLYS LQEAISSVAQALTGKATERASLPGVIRDSTSLRLAAVFPGSFGATLRGPVDAKVEAMIEAGQDPLFPQDETETLLDQAVD VVLDVIDLAGAEGVDDGPIIEAVLPLGGRAFKHLKDLSDAIVDREMTANLDWTHLGQETRRATVDKQSARRLNDVLTMNR VTEATETIHGHLGTASEFHGGRLEIQRDNGEVISAKVADDLVPRLGEFYSQRVAADAIVTIARSTATGAERKSYVVTGLS TLPEPPQLPEAE
Sequences:
>Translated_332_residues MTSVAVLREQIAELEALAVETEASTSFATRMMMRSIDQMRDDLAEAVDLALRPELKVVIEGVPVKGHEIRVDALSRLLYS LQEAISSVAQALTGKATERASLPGVIRDSTSLRLAAVFPGSFGATLRGPVDAKVEAMIEAGQDPLFPQDETETLLDQAVD VVLDVIDLAGAEGVDDGPIIEAVLPLGGRAFKHLKDLSDAIVDREMTANLDWTHLGQETRRATVDKQSARRLNDVLTMNR VTEATETIHGHLGTASEFHGGRLEIQRDNGEVISAKVADDLVPRLGEFYSQRVAADAIVTIARSTATGAERKSYVVTGLS TLPEPPQLPEAE >Mature_331_residues TSVAVLREQIAELEALAVETEASTSFATRMMMRSIDQMRDDLAEAVDLALRPELKVVIEGVPVKGHEIRVDALSRLLYSL QEAISSVAQALTGKATERASLPGVIRDSTSLRLAAVFPGSFGATLRGPVDAKVEAMIEAGQDPLFPQDETETLLDQAVDV VLDVIDLAGAEGVDDGPIIEAVLPLGGRAFKHLKDLSDAIVDREMTANLDWTHLGQETRRATVDKQSARRLNDVLTMNRV TEATETIHGHLGTASEFHGGRLEIQRDNGEVISAKVADDLVPRLGEFYSQRVAADAIVTIARSTATGAERKSYVVTGLST LPEPPQLPEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35769; Mature: 35638
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVAVLREQIAELEALAVETEASTSFATRMMMRSIDQMRDDLAEAVDLALRPELKVVIE CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE GVPVKGHEIRVDALSRLLYSLQEAISSVAQALTGKATERASLPGVIRDSTSLRLAAVFPG CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCEEEEEECCC SFGATLRGPVDAKVEAMIEAGQDPLFPQDETETLLDQAVDVVLDVIDLAGAEGVDDGPII CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH EAVLPLGGRAFKHLKDLSDAIVDREMTANLDWTHLGQETRRATVDKQSARRLNDVLTMNR HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VTEATETIHGHLGTASEFHGGRLEIQRDNGEVISAKVADDLVPRLGEFYSQRVAADAIVT HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IARSTATGAERKSYVVTGLSTLPEPPQLPEAE HHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCC >Mature Secondary Structure TSVAVLREQIAELEALAVETEASTSFATRMMMRSIDQMRDDLAEAVDLALRPELKVVIE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE GVPVKGHEIRVDALSRLLYSLQEAISSVAQALTGKATERASLPGVIRDSTSLRLAAVFPG CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCEEEEEECCC SFGATLRGPVDAKVEAMIEAGQDPLFPQDETETLLDQAVDVVLDVIDLAGAEGVDDGPII CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH EAVLPLGGRAFKHLKDLSDAIVDREMTANLDWTHLGQETRRATVDKQSARRLNDVLTMNR HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VTEATETIHGHLGTASEFHGGRLEIQRDNGEVISAKVADDLVPRLGEFYSQRVAADAIVT HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IARSTATGAERKSYVVTGLSTLPEPPQLPEAE HHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA